Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0675 ATGAGTAAAGAATCATGTTCTGAAGAAAAAGGCTTGAATCTCTTGCATCAGTTGGAAGACATGCTTGAAAATGACCCACTAATTGATGAACTAGGCTACATTCATCCGTCCCAATTCTCCTTGCTTAATGATGAATTGGGCATTTGCTGTGATTCATCTGAAGAAGTTTTGCATCCATCAACAAAAAGGACAGCGGGCTCTGTGGAATCACTTGTTGATACTTCCAACAGAGAGAACTTATATTTTTGGAACAGGGATCATAAACTGGGGATTTCAACCCAAATTCTTCTACAATTATATGGATCTGCTAAACATGCATTTATGTCTGCATTTAAACAATACAAGGCATCTAGTAATCAATCTGACAAAGTTGGCACTTCTTCACATGTCCTTTTATCCTGTGACCATCTTGAAAGTATACTTATGAGACACAGCAGGTCTCTTCTGTTGCTGAGCTGTGACTTTATAACTGCTTGGAATTGCAGAAAGCATGTACTTTCCAAGAAGAATCAATTCTCAATGTTTATGGATGAACTTCACCTTTCAGCACTTGTGCTCTCATATGCACCTAAAAGCGAACAAGCTTGGAGCCATAGGCGGTGGGTAATCAAGTCAATCTCTGCAAACTGTTCAAATTTCAATGAGATTTTAGAGAAAGAATCTGAGCTGGTGGAAAAAATAGCTGAGAGATCAAAGATGAATTACCGTGCTTGGAATCACCGTTGCTGGTTGGTTTCTCACATGAAAATGGAACAGGCTCTACATGAATTGGAGAGAACCAGAAATTGGGCTGCACTGCATGTTGCTGATAATTGTTGCTTTCATTATCGTAGAAGGCTATTAGTCAAGATTTTAGAGGACTCAAGTTGTATGAGAGGTGTATCTTCTGGTCACAAGTCTGATATTGACCAGCTTTGGAAGGATGAAATTGACTGGAACAGAACATTGATAAAGCGTTATGTCGGAAGAGAGGCTCTGTGGCTTCATCGTCGGTTTCTTTCCTTATGCTGGATCAACCATTTTCTAGCAGACTCTAGTGACATATCAAATCCTTCGAAGGAGACAGCCAGCAGGTATCATGAATTTGGCAAATTTCTGGAGAATGAATTATGTCTGTTCAAGTCTTGCTCCACTATTGTGGATAATGACTTTGAGGATCTCCAATCACAAGTGAAGCATTCCGCTTGCTATATCCTATGGTTGAAAATGGAAAGACACCAGCAAATCCATCAGCGTTCTCAATGA 1245 0.3976 MSKESCSEEKGLNLLHQLEDMLENDPLIDELGYIHPSQFSLLNDELGICCDSSEEVLHPSTKRTAGSVESLVDTSNRENLYFWNRDHKLGISTQILLQLYGSAKHAFMSAFKQYKASSNQSDKVGTSSHVLLSCDHLESILMRHSRSLLLLSCDFITAWNCRKHVLSKKNQFSMFMDELHLSALVLSYAPKSEQAWSHRRWVIKSISANCSNFNEILEKESELVEKIAERSKMNYRAWNHRCWLVSHMKMEQALHELERTRNWAALHVADNCCFHYRRRLLVKILEDSSCMRGVSSGHKSDIDQLWKDEIDWNRTLIKRYVGREALWLHRRFLSLCWINHFLADSSDISNPSKETASRYHEFGKFLENELCLFKSCSTIVDNDFEDLQSQVKHSACYILWLKMERHQQIHQRSQ 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0675 414 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 216 250 IPR002088 GO:0008318|GO:0018342
Prci12g0675 414 Pfam Protein prenyltransferase alpha subunit repeat 217 248 IPR002088 GO:0008318|GO:0018342
Prci12g0675 414 Pfam Protein prenyltransferase alpha subunit repeat 306 333 IPR002088 GO:0008318|GO:0018342
Prci12g0675 414 Pfam Protein prenyltransferase alpha subunit repeat 177 204 IPR002088 GO:0008318|GO:0018342
Prci12g0675 414 FunFam Protein prenyltransferase alpha subunit repeat-containing protein 1-B isoform D 110 413 - -
Prci12g0675 414 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 29 406 - -
Prci12g0675 414 Gene3D Protein prenylyltransferase 107 402 - -
Prci12g0675 414 SUPERFAMILY Protein prenylyltransferase 141 374 - -
Prci12g0675 414 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 174 208 IPR002088 GO:0008318|GO:0018342
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0675 Prci-Chr12 6440663 6453229 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0675 K14137 - gmx:100807426 543.888