Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0506 ATGTATGCTGATCGTGTGGAGACTGGAGCGAGGAGGTCAGTAAAGGAACGCCTTAATGGCAATTTTGTCACTGACTCTACTAGGCCTCGGCAAATCACCGGAAAGAGGCAGAGACAAGATGACAAGTGGGAGCATGATCTTTTTGAGGATGACGAACCACGAGTTTCTAATCGTCAAGTCACTGCTCAAGATCTTCGTCTGAAGCTTCAGAAAAAGGGTCTTCAGCCAGCTGGTCAGGGTGGAAAGAATTCTGCTCCAGGTATGCGTGATCTACGTGAAAAGTTATCAGGGACAATGACTCAACAGCCTAGAAACTCAGATCCACCAAAGTCAAAAGTGGAAGTTAAAACAAGCACTAAAAGTGTCATTGTTGAGGCTCCTGCACCACATGTTAAAAGAGCAGCTAACCCAGCTCCCAAAAAGAAGACTTCGCAAAAGACTGATACTTCAGTGGATGAATTTTTGCATTCCCTGGGTCTTGAGAAGTATCTCATAACTTTTCAAGCTGAAGAAGTTGACATGACAGCTCTCATGCACATGACTGATGAGGATCTCAAGGTTATGGGTATACCAATGGGGCCAAGGAAGAAGATACTTTTAGCTTTAGAGTCAAAGGGTTGA 621 0.4444 MYADRVETGARRSVKERLNGNFVTDSTRPRQITGKRQRQDDKWEHDLFEDDEPRVSNRQVTAQDLRLKLQKKGLQPAGQGGKNSAPGMRDLREKLSGTMTQQPRNSDPPKSKVEVKTSTKSVIVEAPAPHVKRAANPAPKKKTSQKTDTSVDEFLHSLGLEKYLITFQAEEVDMTALMHMTDEDLKVMGIPMGPRKKILLALESKG 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0506 206 SUPERFAMILY SAM/Pointed domain 145 203 IPR013761 -
Prci12g0506 206 MobiDBLite consensus disorder prediction 31 57 - -
Prci12g0506 206 FunFam Sterile alpha motif domain-containing protein 148 206 - -
Prci12g0506 206 ProSiteProfiles SAM domain profile. 146 200 IPR001660 GO:0005515
Prci12g0506 206 CDD SAM_superfamily 150 203 - -
Prci12g0506 206 MobiDBLite consensus disorder prediction 1 148 - -
Prci12g0506 206 Pfam SAM domain (Sterile alpha motif) 145 203 IPR001660 GO:0005515
Prci12g0506 206 SMART SAM_4 143 206 IPR001660 GO:0005515
Prci12g0506 206 PANTHER SCP160 100 202 - -
Prci12g0506 206 Gene3D - 148 206 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0506 Prci-Chr12 4398335 4403220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0506 37 205 Glycosyltransferase AT3G07170 62.353 5.90e-66 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0506 - - gmx:100527300 308.145