Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0350 ATGGCGGCAGAGCCACCTCCACCGTCGGAGATCCACCTGAGGATCAATTCTGGGAAGAACAACAATGTGATACACCCAGCGGAGGCGGACGCGGCTCTGCCCTATTCAACAAGTAGAACCCCTGTGGAATATACCGAAGCAAAGCAATTCAAGAGATGGTTTACCTGGCTAATTCCTCTCATTGTTATTGCCAACATCGTTGTGTTTGTAATTACCATGTACGTCAACAATTGCCCCAAAAACTCTGTCTCTTGCGTCGCCCGCTTCCTCGGTCGTTTCTCCTTTCAGCCGCTCAAAGAGAACCCTCTTCTCGGGCCTTCTTCATTAACGCTACAGAAGATGGGAGCTCTTGATGTAGCTAGAGTGGTTCACAGACACCAGGGCTGGCGCCTCATCACTTGCATGTGGTTACATGGTGGTGTCTTCCATGTGTTGGCAAATATGTTGGGTATTCTGATAATCGGGATCCGGCTTGAGCAAGAATTTGGGTTCTTGCGTATTGGATTGCTATTTGTGATTTCTGGATTTGGGGGAAGTCTGCTTTCTGGTCTATTCATTCAGTCAAACATCTCAGTGGGTGCCTCTGGGGCTCTTTTTGGATTGCTCGGAGCCATGCTTTCTGAACTCATTACTAATTGGTCTATGTATGATAACAAGTTTGCAGCACTCTTCACTCTAGTGATTATCGTTGCAGTCAATCTAGCTGTAGGAATCCTCCCACATGTGGACAATTTTGCTCATCTTGGAGGATTTATTACAGGATTTCTTCTTGGATTTGTGTTCCTGATCCGTCCTCAGTTTGGTTGGGTTAGCCAAAGATATGGTTCTTCAGATTACTCTTCTGCCTCAATTAGATCTAAGTTCAAAAAATATCAGTGCATCTTATTTATGCTCTCTCTGATCCTTGTTGTTGCCGGAATTACTGTTGGCCTTATTGCACTTCTCCGTGGTGTGGATGCCAATGATCATTGCTCTTGGTGCCATTATCTGTCTTGTGTCCCAACTTCAAGATGGAGTTGCAATAACGAGCCTTCATCTTGTTTAACAAGCCAACTTGGCAGTCAGCTGAACATGACTTGCTCAAACAGTGGGAAATCCAGCACCTATCTGATTCAAGACCCAACCGATTCACAGATCCAGCAGTTGTGCACTCAGCTCTGTACTTGA 1167 0.4567 MAAEPPPPSEIHLRINSGKNNNVIHPAEADAALPYSTSRTPVEYTEAKQFKRWFTWLIPLIVIANIVVFVITMYVNNCPKNSVSCVARFLGRFSFQPLKENPLLGPSSLTLQKMGALDVARVVHRHQGWRLITCMWLHGGVFHVLANMLGILIIGIRLEQEFGFLRIGLLFVISGFGGSLLSGLFIQSNISVGASGALFGLLGAMLSELITNWSMYDNKFAALFTLVIIVAVNLAVGILPHVDNFAHLGGFITGFLLGFVFLIRPQFGWVSQRYGSSDYSSASIRSKFKKYQCILFMLSLILVVAGITVGLIALLRGVDANDHCSWCHYLSCVPTSRWSCNNEPSSCLTSQLGSQLNMTCSNSGKSSTYLIQDPTDSQIQQLCTQLCT 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0350 388 Gene3D - 48 264 IPR035952 -
Prci12g0350 388 PANTHER RHOMBOID-RELATED 39 340 IPR002610 GO:0004252|GO:0006508|GO:0016020
Prci12g0350 388 SUPERFAMILY Rhomboid-like 53 266 IPR035952 -
Prci12g0350 388 Pfam Rhomboid family 123 264 IPR022764 GO:0004252|GO:0016020
Prci12g0350 388 FunFam RHOMBOID-like protein 51 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0350 Prci-Chr12 3086429 3090229 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0350 - - gmx:100801675 572.778