Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0242 ATGAATTCTTTCGTTACATTTCTTCTTCTCATTTCTTGCATTTTTCCAGCTTTGGTTGACTGCAGAGTCAGAAACTACAAATTCCATGTGGTGACGAAGAACGTGACAAGGCTGTGTTCAAGCAAGCCCATTGTCACCGTCAACGGCAAGTTTCCAGGACCCACACTCTACGCCAGAGAAGGCGATAATGTTATCGTCAAAGTCGTCAACCTCGTCAACCACAACGTTTCCATCCACTGGCATGGTGTCCGGCAACTGCGAACCGGGTGGGCTGACGGACCTTATATCACACAATGTCCGATTCAGCCGGGGCAGAGCTTTGTGTACAACTTCACCATTAGTGGGCAAAGAGGGACGCTTCTATGGCACGGGCATATCAACTGGCTAAGGGCAACAGTGCATGGAGCCTTAGTGATCTTGCCGAAGCGAGGCGTGCCCTATCCCTTCCCAAAACCAGACCATGAGTTGGTGTTGGTGTTAGCAGAATGGTGGAAATCTGATACTGAGGCTGTCATCAATGAAGCTCTCCAATCAGGAGTGGCTCCCAATGTCTCTGATGCTCACACCATCAATGGCCTTCCTGGCACTGTCGCCAATTGTTCTACCCAAGATGTGTTCAAGTTGCCGGTAGAAAGTGGGAAGACATATTTGCTGAGGATCATCAACGCTGCACTCAATGAGGAACTGTTCTTCAAGATCGCCGGCCACAGCGTCACCGTCGTAGAAGTTGACGCCACCTACGTCAAGCCGTTCACCACCGACACCATCATCATCGCTCCGGGCCAAACCACCAACGTCCTTCTAACCGCACACCAGGAATCTGGAAAATACATGATCGCAGCCTCTCCTTTCATGGACGCTCCGGTGGCCGTAGATAACCAGACAGCCACAGCCACCCTTCACTACACAGGCACTAGTCCTCTCTCCGGTGCTTCCCCTACGGTTCTCACCACCCCTCCTCCCAAAAATGCCACCCAAATAGCCAACCAGTTCACCAACTCTCTCAAAAGCCTGAATTCCCCAAAGTACCCCGCCACAGTTCCACAGAAGATTGATCATTCACTTTTATTCACAGTGGGATTAGGGGCTAACCCGTGCCCTACATGCAAAGCAGGAAATGGAAGCAGGGTTGTGGCGGCAGTGAATAACGTGACTTTTGTGATGCCAAACACGGCCTTGCTTCAGGCTCATTACTTCAACATCAAGGGGGTGTTTACCACTGATTTTCCTGCCAGTCCACCTCACGTGTTTAACTATACAGCCAATATAACTCAGAATATACAAACCCAGAACGGGACAAGGCTGTATAGGGTACCCTACAATTCGACGATTCAGGTGGTGTTGCAGGACACAGGGGTGATAGCCCCAGAGAGCCATCCTATTCATCTTCATGGGTTTAATTTCTTTGTGGTGGGGAGAGGTGTAGGGAATTACGACCCCGAGCAAGATCCCAAGAAGTTTAACCAAGTAGATCCTGTGGAGAGGAACACTGTTGCAGTGCCTACTGGTGGCTGGACTGCTCTTAGGTTCACAGCAGATAATCCAGGAGTTTGGTTCTTGCACTGCCATTTTGAGGTGCACACAACATGGGGATTAAAGATGGCATTTTTGGTGGACAATGGGAAAGGTCCTAAAGAATCATTACTTCCACCACCTAAAGATCTTCCAAAATGCTGA 1677 0.4961 MNSFVTFLLLISCIFPALVDCRVRNYKFHVVTKNVTRLCSSKPIVTVNGKFPGPTLYAREGDNVIVKVVNLVNHNVSIHWHGVRQLRTGWADGPXYITQCPIQPGQSFVYNFTISGQRGTLLWHGHINWLRATVHGALVILPKRGVPYPFPKPDHELVLVLAEWWKSDTEAVINEALQSGVAPNVSDAHTINGLPGTVANCSTQDVFKLPVESGKTYLLRIINAALNEELFFKIAGHSVTVVEVDATYVKPFTTDTIIIAPGQTTNVLLTAHQESGKYMIAASPFMDAPVAVDNQTATATLHYTGTSPLSGASPTVLTTPPPKNATQIANQFTNSLKSLNSPKYPATVPQKIDHSLLFTVGLGANPCPTCKAGNGSRVVAAVNNVTFVMPNTALLQAHYFNIKGVFTTDFPASPPHVFNYTANITQNIQTQNGTRLYRVPYNSTIQVVLQDTGVIAPESHPIHLHGFNFFVVGRGVGNYDPEQDPKKFNQVDPVERNTVAVPTGGWTALRFTADNPGVWFLHCHFEVHTTWGLKMAFLVDNGKGPKESLLPPPKDLPKC 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0242 559 FunFam Laccase 12 142 - -
Prci12g0242 559 Pfam Multicopper oxidase 157 305 IPR001117 -
Prci12g0242 559 NCBIfam laccase 21 559 IPR017761 GO:0046274|GO:0048046|GO:0052716
Prci12g0242 559 Gene3D - 153 341 IPR008972 -
Prci12g0242 559 SUPERFAMILY Cupredoxins 349 559 IPR008972 -
Prci12g0242 559 PANTHER MULTI-COPPER OXIDASE 31 547 IPR045087 -
Prci12g0242 559 SUPERFAMILY Cupredoxins 150 321 IPR008972 -
Prci12g0242 559 ProSitePatterns Multicopper oxidases signature 2. 522 533 IPR002355 GO:0005507
Prci12g0242 559 CDD CuRO_2_LCC_plant 158 303 IPR034285 -
Prci12g0242 559 CDD CuRO_1_LCC_plant 26 142 IPR034288 GO:0005507
Prci12g0242 559 ProSitePatterns Multicopper oxidases signature 1. 517 537 IPR033138 -
Prci12g0242 559 FunFam Laccase 154 342 - -
Prci12g0242 559 CDD CuRO_3_LCC_plant 405 542 IPR034289 GO:0005507
Prci12g0242 559 Gene3D - 21 145 IPR008972 -
Prci12g0242 559 Gene3D - 369 559 IPR008972 -
Prci12g0242 559 SUPERFAMILY Cupredoxins 18 170 IPR008972 -
Prci12g0242 559 Pfam Multicopper oxidase 31 143 IPR011707 GO:0005507
Prci12g0242 559 Pfam Multicopper oxidase 410 542 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0242 Prci-Chr12 1998546 2002787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0242 K05909 - gmx:100779825 947.577