Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0218 ATGGAAGCCATCACCAGTTCTTGCTCTAAGCCCCTTTTGGATGGCCTTGGATCTTCTTCCCCAAGGCCGAGGCTTGTTTCTGCCTTTCACTTCTACGACAGGCTTGAATTTTCTTCCTTCTCTAATGATAAAGTCGGCAACCTTCGGTTCCTTCAAACGGTTCACAACAAGGGTGTTTCCCCTTTTCATGTTGTGCCAGCCAAACCCCAGGTGGACTTGGAAACTGAAGAGCCTCAAGCACAGCATACAGGGGAAGCAAAGGTTGTTCGGGTCAAATTTCAGTTACAAAAAGATTGCATGTACGGCGAACAGTTTCATGTAGTAGGTGATGATCCTATGATTGGTGCTTGGGATCCCTCAAATGCACTACCAATGACCTGGTCGGAAGGGCATGTATGGTCTGTTGAGATGGATGCACCTGCTGGGAAATCAATCCAATACAAGTTTATTCTGAAACTAACTTCTGGGGATATTATTTGGCAGCCTGGGTCTGACCGAATTGTCAAGACTTGGGGAACTGTTAACAGAATAACCGTTTGTGAGGATTGGGAGAATGCTGAGCTTCAGAAACTAATAGAGGAAGAAGAATCTGATCACTCAAATGGGAAACCCCAGTTTGACTCAGAAATGTCAAATTTTTCTGAGAATTTGGATCATCTGGAAGAGGATATGCTATCTGATGCAACCAACAATGTACTAGACTTTGAAGATAGCAAAACTCATTTAGAGGAGAAACCACTTGCTCAACCAGACATGCAACAAATTATAGCTGATACTACTTCTTCTTCAATGGAGAGTCCAATGCCCATAGTTGCAGAAAATATAGATTTATCAGAAGATGCCCCCAAGAACACACCAATGCCCATAGTTGCAGAAAATATAGATTTATCAGAAGATGCCCCCAAGAACACACCTCGGAGGAGAGGTGTGAACAATATGGCACTTCAGAGTGAAGTTACAGTCCATGATCTTGAACACATGGGGAAAGGTCCTCAAGTTGATAATCAGGGAAAGAAAGATGTGAAGGGCAACCTATTTGAATTTGAAGAAGGTCCTGTTCTTGTACCTGGCTTGACACCACCTAAAACTGAAGAAACAACTGAAGATAAAGTTGAAGAGAAGGTTAACATGGACAGTTCAGTTGGAGCACTTGAAACCAAGGATCAGAACTTGCCAGAGGTCCAGTTTAATGAGGAGCAAGAAGAATCAGATGATGGAAAACCCCAAGAGCTGGTGGGCAATGAATTTCAAGACAAGTTCCATTCAACCACAGCAATAGGCAAAGTGTCTGAGGTTCACAAAGGTCATGAACATGTCTTGGAAAATGAAGCACTCAGTGATGAGCCAGAGCTGGTTGGCAGTGAATTTCAAGACAAGTTCCATTCAACCACAGCAATAGGCAAAGTGTCCGAGGTTCAGAAAGGTCATGAAAGTGCCCTGGAAAATGAAGCACTCAGTGATGAGCCAGAGCTGGTTGGCAGTGAATTTCAAGACAAGTTCCATTCAACCACAGCAATAGGCAAAGCGTCCGAGGTTCAGAAAGGTCATGAAAGTGCCCTGGAAAATGAAGCACTCAGTGATGAGCCAGAGCTGGTTGGCAGTGAATTTCAAGACAAGTTCCATTCAACCACAGCTGTAGTCAAAGCGTCCGAGGTTCAGAAAGGTCATGAAAATGTCTTGGAAAATGAAGCGCTCAGTGATGAGCCAGAGCTGGTTGGCAGTGAATTTCAAGACAACTTCCATTCAGCCACAGCAGTAGTCAAAGCGTCCGAGGTTCAGAAAGGTCATGAAAATGTCTTGGAAAATGAAGCGCTCAGTGATGAGCCAGAGCTGGTTGGCAGTGAATTTCAAGACAAGTTCGATTCAACCACAGCAGTAGTCAAAGTTTCCGAGGTTCACACAGGTCATGAAAATGTCTTAGAAAGTGACGTTCAATGGGGTCGTGGAATATTGAAGAAGTTTCTGTCAAAGCTAGGGCTGCTATGA 1986 0.4406 MEAITSSCSKPLLDGLGSSSPRPRLVSAFHFYDRLEFSSFSNDKVGNLRFLQTVHNKGVSPFHVVPAKPQVDLETEEPQAQHTGEAKVVRVKFQLQKDCMYGEQFHVVGDDPMIGAWDPSNALPMTWSEGHVWSVEMDAPAGKSIQYKFILKLTSGDIIWQPGSDRIVKTWGTVNRITVCEDWENAELQKLIEEEESDHSNGKPQFDSEMSNFSENLDHLEEDMLSDATNNVLDFEDSKTHLEEKPLAQPDMQQIIADTTSSSMESPMPIVAENIDLSEDAPKNTPMPIVAENIDLSEDAPKNTPRRRGVNNMALQSEVTVHDLEHMGKGPQVDNQGKKDVKGNLFEFEEGPVLVPGLTPPKTEETTEDKVEEKVNMDSSVGALETKDQNLPEVQFNEEQEESDDGKPQELVGNEFQDKFHSTTAIGKVSEVHKGHEHVLENEALSDEPELVGSEFQDKFHSTTAIGKVSEVQKGHESALENEALSDEPELVGSEFQDKFHSTTAIGKASEVQKGHESALENEALSDEPELVGSEFQDKFHSTTAVVKASEVQKGHENVLENEALSDEPELVGSEFQDNFHSATAVVKASEVQKGHENVLENEALSDEPELVGSEFQDKFDSTTAVVKVSEVHTGHENVLESDVQWGRGILKKFLSKLGLL 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0218 661 MobiDBLite consensus disorder prediction 352 411 - -
Prci12g0218 661 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 83 185 IPR002044 GO:2001070
Prci12g0218 661 Pfam Starch binding domain 89 174 IPR002044 GO:2001070
Prci12g0218 661 SUPERFAMILY Starch-binding domain-like 87 181 IPR013784 GO:0030246
Prci12g0218 661 MobiDBLite consensus disorder prediction 509 528 - -
Prci12g0218 661 Gene3D Immunoglobulins 86 184 IPR013783 -
Prci12g0218 661 SMART CBM_20_2 88 180 IPR002044 GO:2001070
Prci12g0218 661 CDD CBM20 90 183 - -
Prci12g0218 661 PANTHER STARCH-BINDING DOMAIN-CONTAINING PROTEIN 1 86 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0218 Prci-Chr12 1613344 1617351 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0218 - - pcin:129288664 1299.26