Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0182 ATGGTGGGAAAAATAGACGCCACTTCGCGGGAAAAGCTTGTGAGTCTCGTGAACTCGGTTAAGTTGGCCATGGACATTCCATCCAAGCTCGATTACTTGCGGCAACTGAAGGTAGAATTGCCTCAAGAAGACCCCGTTTTGCTCACCGAGTTTCTTCCGTGTCTCTTCGAGTTTCAGTCCGATCGTTTCAGTCCAGTTCGCAAATTTGTCACGGAGATGCTTGGTGAAATTGGATCTAAAAACACAGAGTTCTTGCCTGATATTATACCGGTGCTCATTGCTGTTTTGGATGATGATACACCCGCTGTTGTTCGTCAAGCTATATCATGCGGAATTGATTTATTTCATTCCACTCTTGAGAAAATTGCAATACAGGGTTTATACTCAAGTGATCTGGACATTGCACTTGAATCTGCATGGACATGGATGTTAAAGTTCAAAGACAAAGTACACTCACTTGCTTTTCAACATGGTAGTGGTGGTGCAAAGTTGCTGGCCCTGAAGTTTGTTGGAGCAGTTATTCTTCTATACACACCAGATCCAAATGGTTCCTCAGAGCCCCCTCCTCATCAAGGAAGGCTTGTGGAGTTTAACATATCATGGATTCGCAAGGGTCATCCTGTACTCAACTTTAAAGATTTGTCAATTGATGCTAGTCATAGTTTAGGTCTCCTGCTTGATCAACTCAGGTTTCCAACTGTGAATTCTCTCAGTAACTCGGTGATTGTTGTGCTAATTAACAGCCTTTTAGCGATTGCAAAAGACAGGCCTGCCTTCTATGGCCGCATCTTGCCAGTTTTGCTTGGTTTGAAACCGTCAAGCTCTGTTGTTAATGGGATCCGTGTAACAGCAGTACATCATGCGTTGAAAAAGGCCTTTCTCACTTGCTTGAAATGTACACATCCAAGTGCTGCTCCGTGGAGAGAACGTTTAGCTGGTGCCCTGGAGGAAATGCAGTCTGAAGGGATGGCTGATCAGGTGTTCCACCAAGTCTCTGAGATTAATGGAAGTATAAAGAAAGAGAAAGATGACGATCTAGATATTAAGGAAGAAAAACCAGCATCACTTTCATTTGATTCATTGCACACTAATTTAGGGAGGAAACGATTAGGATCACAGGATGGAGGTGATTTAGCTGAAGATGAAGATGTTCCTGAAAAACGGTCCAAAACGACAACCATTGTCTCAGAACCCAAGAAAGAGTTAGATGAAAGCACAAGAGTGTGTTGGGACAACAATGCTTCAACTGTACCACGTTCATCAAGAAGAGAAGTGGATAATGGACCTGTTCAGCAACTTGTTGCAATGTTTGGTGCTTTAGTTGCTCAGGGTGAAGAAGCCGTTGCACCTTTGGAGATTCTTATTTCCAGTATCTCCTCAGACTTGCTAGCTGAGGTGGTAATGGCTAATATGTGTAACCTACCTCCAAATAATCCAAGTGCTGAAGGAGATGATGAACCACTGCATGACATTAGTATAACTGGTTCTGATGGCAAGGCTAAATATCCATCATCATTTGTAGATTGCGTAATGTCGCTTTCTAGTACATTCCCATCAATAACTGTACTTCTTGACGCTAATCAATCAATATCCAATGAGAAATCTCAAGGGGAGGAAGAAATTTCTGCAACTGGAGTGGATAATAATGCTGTGCATTCTGGATTGAATCCTTCATCTGAAAATGTGATGCTGCCCTCTGATTTTCCATCTTCTGATGCCAAAATACCTGGAATGGAGAGTGTGAACACAGGTGTCCCTTCTGACATCCATGATGTGGGCAATTTAGAGAGTGGAATACCTGGCCTGGATTCTTTTGGTCGTAATGTTGCCTTGTCAGAAACTGTAGCTGGTTCCTCATTGGCTTCCTCTGATATAGAAGAAGCCAGTCAAGAACAAGTTATGGGTTTTGGTCAAAAATCACCCCTGAACATTGTTACATCAATATCAACAGATAGGTCCGAGGAGATAAGCCCAAAAGCAGCTGTTACGGATGTAAATAGTGTGGTGTCATCAGCAGCACCTTCTGACAGGTCATCTCGGTTGGTTCTGCCAAAGATGATTGCACCTGTTGTTGACCTTGCAGATGAACAGAAGGATAATTTGCAAAAATGGGCTTTTATTCGTATTATTGATGCTTACAAGCAAATATCAATAGCTGGAGGATCAAAAGTTCGATTTTCAATACTTGCTTATCTAGGAGTTGAGCTTCCCTTGGACCTAGACCCATGGAAACTATTACAAAAGCATGTCTTGGTTGATTACACAAGTCATGAGGGACACGAGTTGACTTTGCGTGTCCTCTACAGGTTATTTGGTGAGGCTGAAGAGGAGCCTGATTTCTTTTCTTCTACAACAGCTGCTTCTGTATATGAAACATTCCTCCTAACAGTGGCAGAAGCACTAAGAGATTCTTTTCCACCTTCTGATAAAGCCTTTAGTAGATTGCTTGGTGAAGCTCCTTATTTGCCAAATTCAGTTTTAAAAGTTTTGGAGAACATGTGTTCTCCTGGAAATTCAGATAAAGTTGAAAAGGAGTCACAGAGTGGGGATAGAGTTACCCAGGGCCTTAGTGCTGTATGGAGTTTGATTCTGCTGAGGCCACCTATTCGAGATACCTGCTTGAAAATTGCTCTGCAGAGTGCAGTACATCAATTGGAGGAAGTGCGGATGAAGGCAATACGTCTGGTGGCAAATAAACTTTATCCTTTAACATCCATTTCTCATCAAATAGAAGATTTTGCAAAGGAAATGCTGTTATCAGTGATGAGTGGTGATGCATCTGAAACTGCTGACAGTGAAGGATCTGTTGCTGAAACACCAAAGGGACCTGATAATGAGAAGTCTTTGATTGAACCATCATCGGTGAGTGGCAACAGTAAGGATTTCTGCTCTGATAATCACCAGTCATGTACACCTGAAAGTGTCTTGCTGGTTTCTGTCTCTGAGGCTCAGAGATGCATGTCATTGTATTTTGCTCTGTGCACCAAGAAACATTCTCTCTTTCAGCAAATATTTGTAATCTATAAAAGCACATCAAAAGCAGTCAAGCAGGCAGTTCATCGTCATATCCCTATACTAGTTCGTACTATGGGCTCATCTCCAGATCTCCTTGAAATTATTTCAGACCCCCCACATGGAAGTGAGAACCTCCTAATGCAGGTGTTGCACACACTTACTGATGGGACAGTCCCTTCAAGGGATTTAATATTTACTATCAAAAGATTACATGATTCAAAATTCAAGGATGCGGAGGTTCTTATTCCTGTATTGGCATATCTTCCAAAAGATGAGGTTATGCTGGTCTTTCCTCACATTGTAAATCTTCCTCTGGATAAGTTCCAAGTTGCACTTGTTCGCATGTTACAGAAATCATCAAATTCTGGTCCAGTGCTTACTCCGGCTGAAGTATTGATAGCTATTCATGGAATTGATCCTGAAAAGGATGGAATTCCCTTGAAGAAGGTCACAGATGCATGCAATGCTTGCTTTGAGCAGCGACAGATTTTCACTCAAGAAGTTCTTGCCAAAGTTCTGAATCAATTGGTCGAGCAAATACCTCTTCCTTTATTGTTCATGCGGACTGTATTGCAAGCTATTGGTGCTTTTCCGACACTGGTGGACTTTATAATGGGTATTCTCTCTCGTCTTGTGGGAAAACAGATCTGGAAATACCCAAAGTTGTGGGTGGGATTCTTGAAGTGTGCACAATTAACACAACCTCAGTCATTTAGTGTATTGCTTCAGCTACCTCCAGCACAACTGGAAAATGCTTTAAACAGATCTGCAGCACTTAAGGCACCATTGGTAGCTCATGCTAGTCAGGCAGATATCCAATCTTCACTACCCAGGTCCGTGTTGGTTGTTCTGGGAATTGCATCAGATCCTCAGGTTTCAAGTCAGCCACAAACTAGTCAAACACAGACAAGTGAGACAGGCAACTCCGAGAAGGATACGTTGACAGAAAAATCCAAAGAATCTTCTACAGCTAGCTGA 3993 0.4227 MVGKIDATSREKLVSLVNSVKLAMDIPSKLDYLRQLKVELPQEDPVLLTEFLPCLFEFQSDRFSPVRKFVTEMLGEIGSKNTEFLPDIIPVLIAVLDDDTPAVVRQAISCGIDLFHSTLEKIAIQGLYSSDLDIALESAWTWMLKFKDKVHSLAFQHGSGGAKLLALKFVGAVILLYTPDPNGSSEPPPHQGRLVEFNISWIRKGHPVLNFKDLSIDASHSLGLLLDQLRFPTVNSLSNSVIVVLINSLLAIAKDRPAFYGRILPVLLGLKPSSSVVNGIRVTAVHHALKKAFLTCLKCTHPSAAPWRERLAGALEEMQSEGMADQVFHQVSEINGSIKKEKDDDLDIKEEKPASLSFDSLHTNLGRKRLGSQDGGDLAEDEDVPEKRSKTTTIVSEPKKELDESTRVCWDNNASTVPRSSRREVDNGPVQQLVAMFGALVAQGEEAVAPLEILISSISSDLLAEVVMANMCNLPPNNPSAEGDDEPLHDISITGSDGKAKYPSSFVDCVMSLSSTFPSITVLLDANQSISNEKSQGEEEISATGVDNNAVHSGLNPSSENVMLPSDFPSSDAKIPGMESVNTGVPSDIHDVGNLESGIPGLDSFGRNVALSETVAGSSLASSDIEEASQEQVMGFGQKSPLNIVTSISTDRSEEISPKAAVTDVNSVVSSAAPSDRSSRLVLPKMIAPVVDLADEQKDNLQKWAFIRIIDAYKQISIAGGSKVRFSILAYLGVELPLDLDPWKLLQKHVLVDYTSHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASVYETFLLTVAEALRDSFPPSDKAFSRLLGEAPYLPNSVLKVLENMCSPGNSDKVEKESQSGDRVTQGLSAVWSLILLRPPIRDTCLKIALQSAVHQLEEVRMKAIRLVANKLYPLTSISHQIEDFAKEMLLSVMSGDASETADSEGSVAETPKGPDNEKSLIEPSSVSGNSKDFCSDNHQSCTPESVLLVSVSEAQRCMSLYFALCTKKHSLFQQIFVIYKSTSKAVKQAVHRHIPILVRTMGSSPDLLEIISDPPHGSENLLMQVLHTLTDGTVPSRDLIFTIKRLHDSKFKDAEVLIPVLAYLPKDEVMLVFPHIVNLPLDKFQVALVRMLQKSSNSGPVLTPAEVLIAIHGIDPEKDGIPLKKVTDACNACFEQRQIFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIMGILSRLVGKQIWKYPKLWVGFLKCAQLTQPQSFSVLLQLPPAQLENALNRSAALKAPLVAHASQADIQSSLPRSVLVVLGIASDPQVSSQPQTSQTQTSETGNSEKDTLTEKSKESSTAS 1330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0182 1330 Pfam Symplekin tight junction protein C terminal 1082 1260 IPR022075 -
Prci12g0182 1330 MobiDBLite consensus disorder prediction 928 960 - -
Prci12g0182 1330 Gene3D - 2 345 IPR011989 -
Prci12g0182 1330 MobiDBLite consensus disorder prediction 373 401 - -
Prci12g0182 1330 SUPERFAMILY ARM repeat 38 270 IPR016024 -
Prci12g0182 1330 Pfam Symplekin/PTA1 N-terminal 101 319 IPR032460 -
Prci12g0182 1330 MobiDBLite consensus disorder prediction 1295 1314 - -
Prci12g0182 1330 MobiDBLite consensus disorder prediction 1295 1330 - -
Prci12g0182 1330 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1322 - -
Prci12g0182 1330 MobiDBLite consensus disorder prediction 367 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0182 Prci-Chr12 1398364 1411448 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0182 K06100 - gmx:100779360 1914.81