Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0084 ATGGGGGCAGGAAGGGAAACGCAAACATTCTATCTCAGCGGGACTCAATCTCTGGCTCCGAATTCACTTGTCAGTTCTGTATGTGGCAGAAATTTGAAAAAAGATCAACTTGGTGGTGTAATATTTGGTTGCAAGACTGCTACCATAAAAGAATGTTTATCTAAACAGCTCTTTGGCTTACCAGCTCAACACTTCTCTTATGTGAAGAATATTGAACCTGGGCTGCCTCTCTTTCTGTTCAACTATAGTGACAGGAAGCTTCATGGAATCTTTGAGGCGGCTAGCAAGGGGAAAATGTCTATAGACCCTTATGGATGGACTGCTAATGGCTCAGAGAGAACACAGTATCCTGCACAGGTGCAAGTTTGTATCCGGCTTCAGTGCCAGCCACTGTCTGAAGATACATTCAGGAAAGTAATTGCTGACAATTACTACCATGGCAATCGCTTCTGGTTTGAGCTAGACCATGGACAAGCTAGCAAGCTTATTTCCTTGCTAGCATCTTCAGCCAGGCCGGGTACTTATATACCACAGAATACAATGAAGTGGGGAACTGTATCTCAATCTCTTCCATCGCATGAAACTTCAGTTAAAGATGAAGTATTTGAAAAACAAACATCAAAAGTAGAACATTCTACTCAATCAACTAGCAGATATCATTCTCCTGGAGTTGCTTCTTCCTTGGATGCTGATAGGGATATCCAGCAGTTGGATTATCATGGGGTATCAAAGGAAGCAGAACAGGATGAAAAATCCCTTATACTCATGAGACTAAAAGAATTGGCTTTGAATCGTAAAAGTCAAAACATTTCTTTGTCAGACAACGTGAAAGGCACTCCTGATGTGAATAACATGAACTCTGCTGAGAAGGGTTGTCTAGAGGCATCAACTGATTTGGAGAAGGAAGAGTGTCCTAGTCCTCCATTTGAGTATCATGACATCATAGCCCAGTTGATGCAAGAGGTCAAAGAATTGACAGCTTTCAAGGAAACACAAACTCAGAAGTGTCATTATCTAGAGCAGAAGCTGGTCATGGCAGAATTGGAAATTCACCATCTAAAAGACCGCTGTACAATATTAGAATCTGCATGTAATCTTTCTCTGGAGCATGATGACAAGACAATCATTCAGCCTTCTGATCATCAGCATTTAGACCTTAAAGAGTCATTGTTTTTAATAGGAGGCTATGATGGAGAATCATCCTTAGCATCTATGGATTTGTATTGTCCTTCCCTGAACGTGATGAAATCTCTGAGGCCCATGAGCTCAGTTCGCTCCTATGCTTCAGCTGTGCAGTTGAATGGGGAGCTTTATGTGTTTGGTGGTGGAAATGGCTGTATTTGGTATGACACAGTCGAGTCATACAGTCCAATTAGTGACAAGTGGACCTCGTGCCCATCTTTAAATCAGAAGAAAGGAAGTCTCGCTGGAGCTGGTTTAAGCAACAAAATATTTGCCATTGGTGGAGGCAATGGAATTGACTGTTATTCAGAAGTTGAGATGCTTGATTTAGACATAGGAAGATGGATCTATGTTCGTTCAATGCTAGAGAAGAGGTTTGCTCTTGCTGCAGTGGAATCCAATGGTGTTATTTACGTCACTGGTGGATTTGATGGGAATGACTATTTGCAGTCTGCTGAAAGATATGACCCTAGGGAATATCATTGGACCAAAATAGCAAACATGAATGCAAAGCGGGGCTGCCACTCGTTGGTTGCCCTAAATGAAAAGTTGTATGCTCTAGGTGGCTTTGATGGAGACGCAATGGTTCCCACTGTTGAGGTTTTTGATCCCCGACTTGAGACATGGATGATGGTGGAGCCCATGAATCATCCTAGGGGGTATTCTGCTGCCACAGTTGTCAATGATTCAATTTATGTGATTGGGGGAGTTAAATTTGGTGAGAACATCTTAGATAATGTTGAGAATTATAAGGAAGGTCAGGGATGGCAAGAAATTTGCAAATCAGTCGTTGGCAAAAGGTGTTTCTTGTCAGCTATTGCCCTGTAG 2010 0.4214 MGAGRETQTFYLSGTQSLAPNSLVSSVCGRNLKKDQLGGVIFGCKTATIKECLSKQLFGLPAQHFSYVKNIEPGLPLFLFNYSDRKLHGIFEAASKGKMSIDPYGWTANGSERTQYPAQVQVCIRLQCQPLSEDTFRKVIADNYYHGNRFWFELDHGQASKLISLLASSAIXPGTYIPQNTMKWGTVSQSLPSHETSVKDEVFEKQTSKVEHSTQSTSRYHSPGVASSLDADRDIQQLDYHGVSKEAEQDEKSLILMRLKELALNRKSQNISLSDNVKGTPDVNNMNSAEKGCLEASTDLEKEECPSPPFEYHDIIAQLMQEVKELTAFKETQTQKCHYLEQKLVMAELEIHHLKDRCTILESACNLSLEHDDKTIIQPSDHQHLDLKESLFLIGGYDGESSLASMDLYCPSLNVMKSLRPMSSVRSYASAVQLNGELYVFGGGNGCIWYDTVESYSPISDKWTSCPSLNQKKGSLAGAGLSNKIFAIGGGNGIDCYSEVEMLDLDIGRWIYVRSMLEKRFALAAVESNGVIYVTGGFDGNDYLQSAERYDPREYHWTKIANMNAKRGCHSLVALNEKLYALGGFDGDAMVPTVEVFDPRLETWMMVEPMNHPRGYSAATVVNDSIYVIGGVKFGENILDNVENYKEGQGWQEICKSVVGKRCFLSAIAL 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0084 670 PANTHER - 25 668 IPR044832 GO:0034976
Prci12g0084 670 Gene3D - 512 670 IPR015915 GO:0005515
Prci12g0084 670 ProSiteProfiles DCD domain profile. 35 168 IPR013989 -
Prci12g0084 670 Pfam Development and cell death domain 38 165 IPR013989 -
Prci12g0084 670 Pfam Kelch motif 426 470 IPR006652 GO:0005515
Prci12g0084 670 Pfam Kelch motif 613 645 IPR006652 GO:0005515
Prci12g0084 670 Pfam Kelch motif 523 564 IPR006652 GO:0005515
Prci12g0084 670 Pfam Kelch motif 567 611 IPR006652 GO:0005515
Prci12g0084 670 Pfam Kelch motif 481 516 IPR006652 GO:0005515
Prci12g0084 670 Gene3D - 378 511 IPR015915 GO:0005515
Prci12g0084 670 MobiDBLite consensus disorder prediction 209 224 - -
Prci12g0084 670 MobiDBLite consensus disorder prediction 203 228 - -
Prci12g0084 670 SMART dcd 35 168 IPR013989 -
Prci12g0084 670 SUPERFAMILY Kelch motif 389 668 IPR015915 GO:0005515
Prci12g0084 670 SMART kelc_smart 390 436 IPR006652 GO:0005515
Prci12g0084 670 SMART kelc_smart 484 530 IPR006652 GO:0005515
Prci12g0084 670 SMART kelc_smart 578 624 IPR006652 GO:0005515
Prci12g0084 670 SMART kelc_smart 531 577 IPR006652 GO:0005515
Prci12g0084 670 SMART kelc_smart 437 483 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0084 Prci-Chr12 735262 741428 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0084 - - pvu:PHAVU_008G092000g 848.966