Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0004 ATGACAGGCATGATGGGCTTATTGGCGACGACATGGAAGAATTCTCTGAGAAGGAAGCTTCAACTAAAACCGATGGTTCTTCATACTGTAAAAGAAGGACAAAGGAGCCACATTTTAATGTCTCCACCTCTTGTGTCTCTGGACCTACCTGACATCTGGACTCCAAATTCATCACGTTTTAGTGTTTCATCAGTACACAAAAGCTTTAATGAGCAGACAGCTAGATTGTTGGATGGAAAAATGGTTTCTATGGAAATCAGATCGAGCATAGCTGGTGAGGTAAGGCGGATGAAGAAGTGCACTGGGAATGTTCCCGGGTTAGCTGTGATTATGGTGGGCCAGAGATGGGATTCTCAGATTTATGTTCGCAACAAGATAAAAGCATGTGAAGAAGTTGGAATCAAGTCCTCTGTAACTGAACTACCGACTGACTGTACAGAAGCTGAAGTTCAGAATGCTTTGTTGAGATTTAACAAGGATCAATCAGTTCATGGTATTCTTGTGCAACTTCCTCTACCCCAACATCTAGATGAAAGCAAAGTTTTGGATGTTCTATGCCTAGAAAAGGACGTGGATGGCTTTCATCCTCTTAATATGGGGAATCTCGCCATAATAGGAAGGGAACCACTATTTATTCCATGTACTCCAAAGGGCTGCGTTGAGTTATTGATTAGATCTGGAGTGGAGATCATTGGAAAGAAAGCTGTTGTGATTGGAAGAAGTAACATTGTCGGTCTACCTACATCCTTGTTACTGCAGAGACACCATGCAACGGTCACTGTTATACATGCATTTACAGAAAAACCTGAACAGGTCACGTCAGAAGCTGATATTGTAGTTTCGGCTGCTGGAGTACCCAATATGGTCCGTGGCAACTGGATAAAGCCTGGTGCAATAGTCATTGACGTTGGTACAAGTCCAGTTGAGGACTCGAGCTGCGAGGATGGTTACCGTCTTATAGGAGATGTATGCTACGAAGAAGCCGTAAATGTGGCATCTGTCATTACTCCTGTTCCGGGTGGAGTTGGGCCTATGACCGTTGCCATGCTACTGTCTAACACTCTAGATTCTGCAAAACGCATGCTTGATTTTAATTGA 1098 0.4344 MTGMMGLLATTWKNSLRRKLQLKPMVLHTVKEGQRSHILMSPPLVSLDLPDIWTPNSSRFSVSSVHKSFNEQTARLLDGKMVSMEIRSSIAGEVRRMKKCTGNVPGLAVIMVGQRWDSQIYVRNKIKACEEVGIKSSVTELPTDCTEAEVQNALLRFNKDQSVHGILVQLPLPQHLDESKVLDVLCLEKDVDGFHPLNMGNLAIIGREPLFIPCTPKGCVELLIRSGVEIIGKKAVVIGRSNIVGLPTSLLLQRHHATVTVIHAFTEKPEQVTSEADIVVSAAGVPNMVRGNWIKPGAIVIDVGTSPVEDSSCEDGYRLIGDVCYEEAVNVASVITPVPGGVGPMTVAMLLSNTLDSAKRMLDFN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0004 365 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 194 359 IPR036291 -
Prci12g0004 365 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 77 192 IPR020630 GO:0004488
Prci12g0004 365 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 73 360 - -
Prci12g0004 365 Hamap Bifunctional protein FolD [folD]. 74 362 IPR000672 GO:0004488
Prci12g0004 365 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 146 173 IPR000672 GO:0004488
Prci12g0004 365 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 318 334 IPR000672 GO:0004488
Prci12g0004 365 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 181 202 IPR000672 GO:0004488
Prci12g0004 365 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 228 248 IPR000672 GO:0004488
Prci12g0004 365 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 335 353 IPR000672 GO:0004488
Prci12g0004 365 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 105 127 IPR000672 GO:0004488
Prci12g0004 365 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 277 306 IPR000672 GO:0004488
Prci12g0004 365 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 195 360 IPR020631 GO:0004488
Prci12g0004 365 Gene3D - 77 338 - -
Prci12g0004 365 Gene3D Leucine Dehydrogenase, chain A, domain 1 79 356 - -
Prci12g0004 365 FunFam Bifunctional protein FolD 211 338 - -
Prci12g0004 365 CDD NAD_bind_m-THF_DH_Cyclohyd 188 359 IPR020631 GO:0004488
Prci12g0004 365 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 339 347 IPR020867 GO:0003824
Prci12g0004 365 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 74 193 IPR046346 -
Prci12g0004 365 FunFam C-1-tetrahydrofolate synthase, cytoplasmic, putative 79 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0004 Prci-Chr12 26363 34035 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0004 - - gmx:100791604 574.318