Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g3003 ATGACGCCGTGGGTAAGGGTCACCGGAACTATCAAAGACAAAGGAAGCATTTGGGCGGCCAAGTTCGCTCCGCCCACCATCCTCCGGAACCCCGTTCTCGAGACGGCCGTCATCAAAGCTACCAGCCACGATGAGCGCCACATCGACTACAAGAACGTCGAGAGAGTCATGCAATGGCTCGCCGCCTCGCCGCTTCACCTGAAACCTCTCGTTTTCAGTTTGTCCTTGCGCATGAAGAAGACGCGTAGCTGGCCCGTCGCTCTCAAGGGCTTAATGCTCATCCATGGAATTTTCTGTTGCGACTTCCCTGCCCTACAGAAAATCGGACGCTTACCTTTTGATCTCTCCGATTTCACCGATCGCCATTCCAAATCAGACAAGGTATGGGGCTTCAATGCTTTCGTTCGTTCGTATTTTACGTATTTGGATCAGCGATCAGCGTTTGTGTCGTCCGAATACCAAAAGAGAAGCAAACAGAGGAAGGAGATCGAGGACACGTTGATGCAAGAGCTGGAGAAATTGCAGAAGATGCAAACCCTAATCGACACGATCCTCCAGATCAGGCCTCTGAACGAGCGAATAAACAACGTGGCCCTGATTCTGGAAGCCATGGATTGCATGGTCGTGGAGCTGTCCGATCTGTACGGTAAATTCTGCGGAGAGATGTCTCGAATCCTCTTGAGAATTTATGACATGGGAGGGAAAATGGAAGCCAGTTTAGGGCTTCGTGTTGTGCAGAAAGCTGCAATACAAGGGGAAGAACTTGCTTGTTACTTCGAGTTTTGCAGAGAAATGGGGATAGTCCATGCTTATCGGAGCCCCAAAGTTGAACGAATCTCTGAAGAAAACATTCGAACTCTGGAGCGAATGGCCAATGGGGAAGACGAGAAGAAGATGATAGAGATGGAGAAAAAGGAAGAGAAGGGCATAGTGCTGCCATCGAAGGAAGGTTCAGAGACAGTGATAACAGAGAAATGGGAGGTATTTGAGGACGATAATAGAGGTTTGAATGATGGGAATAATAGTATAATTGCATCGGCCAATTCTAACCCCTTTCTAGAGGAATCATTCTATAGCCTCGTACCTTATAATCCACCTCTTCCAGATTTAATCACTTTCTAG 1122 0.4813 MTPWVRVTGTIKDKGSIWAAKFAPPTILRNPVLETAVIKATSHDERHIDYKNVERVMQWLAASPLHLKPLVFSLSLRMKKTRSWPVALKGLMLIHGIFCCDFPALQKIGRLPFDLSDFTDRHSKSDKVWGFNAFVRSYFTYLDQRSAFVSSEYQKRSKQRKEIEDTLMQELEKLQKMQTLIDTILQIRPLNERINNVALILEAMDCMVVELSDLYGKFCGEMSRILLRIYDMGGKMEASLGLRVVQKAAIQGEELACYFEFCREMGIVHAYRSPKVERISEENIRTLERMANGEDEKKMIEMEKKEEKGIVLPSKEGSETVITEKWEVFEDDNRGLNDGNNSIIASANSNPFLEESFYSLVPYNPPLPDLITF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g3003 373 Gene3D - 6 152 IPR008942 -
Prci10g3003 373 CDD ANTH_N_AP180_plant 33 148 - -
Prci10g3003 373 Coils Coil 160 180 - -
Prci10g3003 373 Gene3D ANTH domain 154 311 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Prci10g3003 373 SUPERFAMILY GAT-like domain 169 290 - -
Prci10g3003 373 SUPERFAMILY ENTH/VHS domain 33 149 IPR008942 -
Prci10g3003 373 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Prci10g3003 373 Pfam ANTH domain 33 290 IPR011417 GO:0005543
Prci10g3003 373 FunFam Putative clathrin assembly protein 7 153 - -
Prci10g3003 373 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 313 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g3003 Prci-Chr10 38574901 38576186 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g3003 - - gmx:100814886 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g3003 10 38574901 38576186 Prci10g3003 10 38574901 38576186 ECH