Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1848 ATGAAGAGAGGGAAGTTAGAGCTGCCGGTGTTGCCCAATAGGTTCAGGCTGCTTCAAATTCTGATGGGCGTAATCTTGCTTTACTTTCTCTTCATGAGCTTCGAAATCCCTCTTGGTCTTCGAACAGGGTTTTCGTCACTTTCTTCTTCCGACGCTGCTTCTGGGTTTCTCAATGACGCATTGCCTAGGCCTTTGTTACTCGACACCGACGAGGAACAACAACTTACGAATAGTATCACAGAAATTCGACCCTCCGACGAAGCATTTCGGGTTTTTCGAGGATCAAGGCACCGAAAACCCGAGCGTCAAATGCACGAGTTGAAGAAAATTTCCGGTTTAGTCTTCAACGACACTTCATCCGACGCTAATGCCGCCGATAAAGATGGGTTTTCTGTACTTCAGAAGGAAGCGATCCATGCTTGGATAGTGGGAAAGAAGCTCTGGGAAGATGTAGAAAGTGGAAAAATAGAGAATGAGACGAAGTCGAGGCCTGAGAATCATTTGGACTCATGCCCACACTCGATTTCAATATCGGGGTCGGAATTTCGGGAGCAGAAAGGCGTCATGGTGCTGCCATGTGGCTTGACTCTGTGGTCGCACCTTACGGTGGTTGGGACACCGCTCTGGGCTCATGCAGAGCATGATCCCAAGATATCGATTGTGAAGGAAGGGGATGACTCAGTGATGGTGTCGCAGTTCATGATGGAATTGCAGGGTTTGAAGACTGTGGATAACGAGGAGCCACCTAGGATTCTGCATTTCAATCCGAGGTTGAAAGGTGATTGGAGTGGGAAACCAGTGATCGAGCAGAACACATGCTACAGGATGCAGTGGGGTACTGCCCTCAGGTGTGATGGTTGGAAATCTCGGGTCGACGAGGAAACTGTTGATGGTCGAGTAAAGTGTGAGAAGTGGATTCGTGATGACGACAACCACTCTGAAGAGTCGAAGGTGACATGGTGGTTAAGTAGACTGATAGGGAGAAAGAAGAAGGTGGCTGTAGATTGGCCCTATCCTTTTGCTGAGGGAAAGTTGTTTGTTATCACCTTAAGTGCTGGCCTGGAAGGCTACCATGTCAATGTGGATGGGAGGCATGTGACATCTTTTCCTTATCGAACAGGCTTTACACTTGAGGATGCTACTGGACTATCTATAAATGGGGATGTTGATGTGCATGCTGTTTATGCTGCTTCCTTACCAACATCACATCCAAGTTTTGCTCCTCAGATGCATCTTGAAATGCTTCCTCAATGGAAAGCTCCGCCTCTCCTTCATTTGAATGTGGAGGTTTTCATTGGAATCCTTTCTGCTGGCAACCATTTTGCAGAACGAATGGCAGTGAGGAAGTCTTGGATGCAACATAAGTTAATCAAGTCTTCACATGTTGTGGCTCGATTCTTTGTTGCCTTGCATGGAAGAAAGGATATAAATGTTGAGATAAAGAAAGAAGCAGAGTATTTTGGTGATATCATTATAGTCCCGTACATGGATCATTATGACCTTGTTGTGTTGAAGACTATAGCTATCTGTGAATATGGGACTCGTTCAATTGCTGCAGAGTATATTATGAAGTGTGATGATGATACATTTGTCAGGGTGGATTCAATCATTGGGGAAGCAAGAAAAGTTCCAAGAGATAGAAGTCTTTACATTGGAAATATGAATTATCACCATAGACCTCTTCGCCACGGTAAATGGGCAGTGACATATGAGGAATGGCTGGAAGAAGAGTATCCTCCCTATGCTAACGGCCCGGGTTACATAATGTCCTCTGACATTGCCGAGTTCATTGTATCTGAGTTCGAGAAGCACAGATTAAACTTGTTCAAGATGGAGGATGTGAGCATGGGAATGTGGGTAGAGCAGTTCAACGCCTCAAGACCTGTAGAATACGTGCACAGCTTCAAGTTCTGCCAGTTCGGTTGCATCGACGATTACTACACGGCGCATTACCAGTCTCCACGTCAGATGACGTGTATGTGGGCCAAGTTGCAGCTTCAAGGAAAACCCCTCTGCTGCAGCATGAGATGA 2031 0.4609 MKRGKLELPVLPNRFRLLQILMGVILLYFLFMSFEIPLGLRTGFSSLSSSDAASGFLNDALPRPLLLDTDEEQQLTNSITEIRPSDEAFRVFRGSRHRKPERQMHELKKISGLVFNDTSSDANAADKDGFSVLQKEAIHAWIVGKKLWEDVESGKIENETKSRPENHLDSCPHSISISGSEFREQKGVMVLPCGLTLWSHLTVVGTPLWAHAEHDPKISIVKEGDDSVMVSQFMMELQGLKTVDNEEPPRILHFNPRLKGDWSGKPVIEQNTCYRMQWGTALRCDGWKSRVDEETVDGRVKCEKWIRDDDNHSEESKVTWWLSRLIGRKKKVAVDWPYPFAEGKLFVITLSAGLEGYHVNVDGRHVTSFPYRTGFTLEDATGLSINGDVDVHAVYAASLPTSHPSFAPQMHLEMLPQWKAPPLLHLNVEVFIGILSAGNHFAERMAVRKSWMQHKLIKSSHVVARFFVALHGRKDINVEIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGTRSIAAEYIMKCDDDTFVRVDSIIGEARKVPRDRSLYIGNMNYHHRPLRHGKWAVTYEEWLEEEYPPYANGPGYIMSSDIAEFIVSEFEKHRLNLFKMEDVSMGMWVEQFNASRPVEYVHSFKFCQFGCIDDYYTAHYQSPRQMTCMWAKLQLQGKPLCCSMR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1848 676 FunFam Hydroxyproline O-galactosyltransferase 421 664 - -
Prci10g1848 676 Gene3D - 422 654 - -
Prci10g1848 676 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 187 397 IPR001079 GO:0030246
Prci10g1848 676 SMART Gal_bind_lectin_2 191 396 IPR001079 GO:0030246
Prci10g1848 676 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 378 626 IPR002659 GO:0006486|GO:0016020|GO:0016758
Prci10g1848 676 FunFam Hydroxyproline O-galactosyltransferase GALT2 311 395 - -
Prci10g1848 676 CDD GLECT 191 394 IPR001079 GO:0030246
Prci10g1848 676 Gene3D - 219 395 - -
Prci10g1848 676 SUPERFAMILY Concanavalin A-like lectins/glucanases 189 395 IPR013320 -
Prci10g1848 676 Pfam Galactoside-binding lectin 188 395 IPR001079 GO:0030246
Prci10g1848 676 FunFam Hydroxyproline O-galactosyltransferase GALT4 186 304 - -
Prci10g1848 676 Pfam Galactosyltransferase 443 626 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1848 Prci-Chr10 15286605 15291706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1848 16 676 Glycosyltransferase AT1G74800 62.930 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1848 K20843 - qsa:O6P43_025383 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1848 10 15286605 15291706 Prci10g1848 10 15286605 15291706 ECH