LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci10g1758	ATGAATCCCTTCTCTTCAGGGACGCGCTTGAGGGACATGATTCGGGCCATACGTACCTGCAAAACAGCAGCTGAAGAACGTGCTGTTGTGAGAAAAGAGTGCGCTGCCATTCGTGCTGCGATTGATGAAAATGATCAAGTCTACAGGCATCGGAATCTGGCTAAGCTAATGTTCATACACATGCTTGGCTACCCAACACATTTTGGTCAAATGGAATGCCTCAAGTTGATTGCTTCTCCTGGATTTCCGGAGAAGAGAATAGGTTATCTTGGTCTTATGTTGCTTCTTGATGAAAGACAAGAAGTTCTGATGTTGGTCACAAACTCCTTGAAACAAGATCTCAATCACACAAATCAGTATATTGTTGGACTTGCTCTTTGTGCTTTAGGAAACATTTGTTCAGCAGAAATGGCTCGTGATCTTGCACCAGAGGTTGAGAGGTTGCTGCAATTTCGAGATCCAAATGTCCGGAAAAAGGCAGCATTATGCGCAATAAGAATCGTAAAGAAAGTTCCAGACTTGGCAGAAAATTTTATTAATTCTGCTGCGGTGTTATTTAAGGAGAAGCATCATGGAGTTTTGATCACTGGGGTTCAACTCTGCACAGAACTGTGTAAAGTTAGCGCAGAAGCCCTTGAATACTTTAGAATGAAATGCACGGAGGGTGTTGTCAGAAGTCTCAAGGACCTAGTTAACAGTCCTTATGCACCAGAGTATGACATTGCTGGTATCACTGATCCTTTCCTCCACATTAGATTGCTTAAGCTTTTGCGAGTACTGGGTGAAGGTGATGCTGATGCTAGTGACTTAATGAATGACATACTTGCCCAGGTGGCTACCAAGACGGAGTCAAATAAAGTTGCAGGAAATGCCATTTTATATGAATGTGTACAAACAATCATGAGTGTTGAAGATAGTGGTGGCCTACGTGTGCTTGCCATCAATATCCTTGGAAGATTCTTGTCAAACCGTGACAACAATATTAGGTATGTGGCATTAAACATGCTGATGAAGGCTGTGACAGTTGATGCTCAGGCAGTGCAGAGGCATCGTGCAACTATTCTGGAATGTGTGAAGGATTCAGATGCTTCAATTCAGAAAAGAGCTCTTGAACTTGTTTACGTTTTGGTGAATGAAAGTAATGTGAGGGCCTTAACAAAAGAGCTAATTGATTATCTGGAAGTCAGTGATCAAGAATTCAAGCCTGACCTTACTGCCAAAATTTGCTCAATAGTTGCCAAGTTTTCTCCAGAGAAGGTGTGGTACATTGATCAGATGCTTAAGGTTCTTTCTGAGGCTGGAAACTTTGTAAAAGATGAAGTGTGGCATGCGTTAATTGTTGTTATAAGCAATGCTTATGACCTTCATGGCTACACAGTAAGAGCATTATACAGAGCACTTCAAACTTCCGTTGAACAGGAATGTCTTGTTCGAGTTGCAGTGTGGTGCATTGGAGAATATGGTGATATTTTAGTTAAGAATGTTGGAATGCTTGACATAGAAGATCCAATAGTGGTGACTGAATCAGATGCTGTGGATGTTCTAGAGATGGCTATAAAACGACATGCATCAGATCTTACAACAAAAGCAATGGCTTTGATTGCCCTTTTGAAACTTAGTTCACGTTTTCCGTCTTGTTCAGAGAGAATCAGGAATATAGTCATTCAGTATAAAGGGAACCTGGTGCTTGAATTGCAGCAAAGATCTACAGAATTCAATAAAATTCTTTCAAATCATCAAAATATTAGTTCTGCACTTGTAGAAAGGATGCCAGTTTTAGATGAGGCAGCTTTCATTGGAAGGAAAGCTGGCTCTATGCCAGGCACAGCTTCAACTCCAGCAGGACCTACAGTTAATATTCCAAACGGAGTTGCCAAACCTGCTGTGGCTCCTCTTGTAGATCTGCTTGATTTGAGCTCAGATGATGTTCCTGCACCTAGCTCTTCTGGTGGTGATCTTCTTCAGGACCTTCTTGGTGTTGATTTGCCATCAGCATCACCATCAGGATCACAACAGCTGGTTTCTGGTCAAGCCCCAAGAAGTGGTACCGACGTTCTTTTGGATCTTTTGTCTATTGGATCACCTTCTGTGCCTACTACGTCACCTTCTGCACAAAGCCTCTCATCTACAACAGACATCTTAAGCTACAGTATGAATAACAAAACACCAGTTTCACCACTGGATGATCTCACGTCTCTCCCACTTTCTGCAAGAGCAACTTCTAATGCTGGAGCTGCTCCTATGATGGATTTGTTGGATGGCTTAGCCACCAGCCCTCCGACAGAAAACAATGGACCAGTTTATCCATCTATAACTGCATTTGAGAGCAGCTCCGTGAGGGTGACATTCAATTTCTCCAAAGAACCAGGAAAACCACAAACAACAATTATTCAAGCTACCTTTATGAATTTGACATCTAATACATATACAGATTTTGTTTTCCAGGCAGCAGTTCCTAAGTTTCTTCAATTGCACTTAGACCCGGCTAGTGGCAATGCTCTGCCTGCTAGTAGTGATGGGTCCATCACACAAAAATTGAGAGTTACTAACACCCAACATGGAAAGAAATCTCTCATCATGCGTGTAAGGATAGCGTACAAGATAAATGGCAAGGATACACTAGAAGAAGGACAAATCAATAATTTTCCTCGTGAGTTGTGA	2661	0.4194	MNPFSSGTRLRDMIRAIRTCKTAAEERAVVRKECAAIRAAIDENDQVYRHRNLAKLMFIHMLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNVRKKAALCAIRIVKKVPDLAENFINSAAVLFKEKHHGVLITGVQLCTELCKVSAEALEYFRMKCTEGVVRSLKDLVNSPYAPEYDIAGITDPFLHIRLLKLLRVLGEGDADASDLMNDILAQVATKTESNKVAGNAILYECVQTIMSVEDSGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAVTVDAQAVQRHRATILECVKDSDASIQKRALELVYVLVNESNVRALTKELIDYLEVSDQEFKPDLTAKICSIVAKFSPEKVWYIDQMLKVLSEAGNFVKDEVWHALIVVISNAYDLHGYTVRALYRALQTSVEQECLVRVAVWCIGEYGDILVKNVGMLDIEDPIVVTESDAVDVLEMAIKRHASDLTTKAMALIALLKLSSRFPSCSERIRNIVIQYKGNLVLELQQRSTEFNKILSNHQNISSALVERMPVLDEAAFIGRKAGSMPGTASTPAGPTVNIPNGVAKPAVAPLVDLLDLSSDDVPAPSSSGGDLLQDLLGVDLPSASPSGSQQLVSGQAPRSGTDVLLDLLSIGSPSVPTTSPSAQSLSSTTDILSYSMNNKTPVSPLDDLTSLPLSARATSNAGAAPMMDLLDGLATSPPTENNGPVYPSITAFESSSVRVTFNFSKEPGKPQTTIIQATFMNLTSNTYTDFVFQAAVPKFLQLHLDPASGNALPASSDGSITQKLRVTNTQHGKKSLIMRVRIAYKINGKDTLEEGQINNFPREL	886

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci10g1758	886	Pfam	Adaptin N terminal region	27	579	IPR002553	GO:0006886\|GO:0016192\|GO:0030117
	Prci10g1758	886	SUPERFAMILY	Clathrin adaptor appendage domain	743	884	IPR013041	-
	Prci10g1758	886	FunFam	AP-1 complex subunit gamma	757	886	-	-
	Prci10g1758	886	ProSiteProfiles	Gamma-adaptin ear (GAE) domain profile.	766	883	IPR008153	-
	Prci10g1758	886	MobiDBLite	consensus disorder prediction	664	679	-	-
	Prci10g1758	886	Gene3D	-	2	594	IPR011989	-
	Prci10g1758	886	FunFam	AP-1 complex subunit gamma	2	594	-	-
	Prci10g1758	886	SUPERFAMILY	ARM repeat	25	593	IPR016024	-
	Prci10g1758	886	PANTHER	ADAPTIN, ALPHA/GAMMA/EPSILON	11	874	-	-
	Prci10g1758	886	Pfam	Adaptin C-terminal domain	769	883	IPR008152	GO:0006886\|GO:0016192
	Prci10g1758	886	MobiDBLite	consensus disorder prediction	643	680	-	-
	Prci10g1758	886	Gene3D	-	755	885	-	-
	Prci10g1758	886	SMART	alpha_adaptinc2	763	883	IPR008152	GO:0006886\|GO:0016192
	Prci10g1758	886	PIRSF	AP1_gamma	6	886	IPR017107	GO:0005794\|GO:0016192\|GO:0030121

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci10g1758	Prci-Chr10	13221216	13237430	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci10g1758	K12391		-	gmx:100802164	1395.18

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Prci10g1758	10	13221216	13237430	Prci10g1758	10	13221216	13237430	ECH