Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1719 ATGCACGTTGGCCTTGTGTCCCAAGGAATGCCCAGGTTTCCACACCCTTATGGAACTATGGTTCGTCCTTCATTTCCTCCACGCCCACCTGGAGCTGTTAATGTGCTTCCAGCTGTATCACGCCCACCCGTAGCAGGAATCCCTCCTGTTCGCCCTGTCATTCCTCCTGTGGTTAGACCAGTGGTTGCTCCTAACATTACACCTGCTGATAAACCACAAACTACGGTTTATATTGGAAAGATTGCATCAACAGTGGAAAATGAATTCATGCTTTCACTACTTCAGTTATGTGGACCTATCAAGAGTTGGAAACGTCCTCAAAATCCAACAAATGGAACTCCTTTAAGCTTTGGATTTTGGGAGTTTGATTCTGCTGAAGGCGTTCTCCGTGCATTGCGTCTGCTCAATAATTTGAATGTTGATGGGCAAGAATTAATGGTCAATCCTAATGATGCTACGAAAGAATATCTGGAGAAGTATGTTAAGAAGAAAAATGAGAACTTGCAAAAGGATACGCAGGCTGTTGGATCTGACAAAGATGATGAGAATGCACCACCTTCGAATGCAAAAGAGGATGAAAAGCCAGATGACTCAAAGAAAGATGACAGCAAGTCAGGGAACAAGGAAAATCATAATGCGACAAATCTTGGTATCATTACTGATGAAGACAGGGAAGCTGATAGAGAGGCCTTGGAGAAGATTACAAACATGATAGAGGAGAGACTGAAGACAAGACCTTTACCTCCACCTCCTGCACAGGCAGCTCCTGATGGCGCTGCAAACTCAGCTTTGGAACAACCTTCAAAGGCAAGAGATGGAGACTCTGATGCAGATACAGTGAATAATGAAGCAGGTGATGATAGAAATGACAAGGAAACAAATAGTGAGAACAAAGCAACCAGTGAACATGATAAGCCTGAGACCCCTGATAGAAGGCATGATAGGAGGAGCAGAGAAAGAGACCGAGATAGAGAACTAAAACGAGAAAAGGATAGGGAGCTTGAAAGATATGAAAGAGAAGCAGAGCGGGAACGCATTAGGAAAGAGAGGGAACAGAGGAGGAGGATTGAGGAGGCTGAGCGCCAGTACGAAACATGTTTGAAGGATTGGGAGTATAGGGAAAGAGAGAGAGAGAAAGAACGTCAATATGAGAAGGAGAAGGAGAAAGAACGGGAGCGCAAACGTAGAAAGGAGATACTTTATGACGAAGAGGATGATGATGATGATTCAAGGAAGAGGTGGCGCAGAAGTGCGTTAGATGAGAAACGAAAGAAAAGAATGCGGGAAAAGGAAGAGGACCTGGCTGACAGACAAAAGGAAGAGGAAGAAATTGCTGATGCCAAAAGGAGGGCTGAGGAGGATCAACAACTGAAGCAGCAGAGAGATGCACTGAGGCTATTTTCTGAGCATGTCAATGGTGGTGAAAAAAGTATGGCTACTGAGGATATGACTAATCAGGCCAAAAATATTGTTCCTCAACAAGACACTGTTGCTGACCATGGTTATGAAGGCCATATAGGTGATGGTAATCCGCTAAATGGCATCAATGATGAATCAACCATGGCATCAGTTGCTGTTTCTGATGCACGACAGAGTGGCAATGTCCCTGCTAAGAAGTTGGGTTTTGGATTGGTTGGTTCTGGGAAAAGAACTACTGTTCCTTCTGTCTTCCATGAGGATGAGGAGGATGATGCACGCAAGGATAAAAAGATGAGGCCTCTGGTTCCAATTGATTACTCAACTGAAGAACTGCAGGCTGTTCAATCAACTGTTTCTGGGGCCCCACCTGCAAATTTGGCTGCAGCAGCGGAATTTGCTAAGCGCTTATCCAATGCCAATATCAAGGAAGAGAAGGTAGATGGAGATTGGGATAGAATTAGGCGTTCTAGTGAGAAGTCTAACTACCGAGATAGGGACAGGAATGATGAAGATGGCTCTCACAACAAAGATGAAAGCAGGGAAAAAATTTCTGATCGTGACAGGGATCGAGATCGTGGGTTGGAGAAATTGAAGACATCAGATAACAAAAAGCTATTAGATGCGAAACAGTTGATTGATATGATACCGAAGACCAAAGATGAGCTCTTCTCATATGAGATAAATTGGGCAGTGTATGACAAGCACCATCTACATGAAAGAATGAGACCGTGGATATCAAAGAAGATCACAGAGTTCTTGGGGGAAGAAGAAACGACATTGGTAGATTACATAGTTTCAAGTACACAGGAACATGTGAAAGCATCGCAGATGCTGGAGCTGCTCCAATCCATTTTAGATGAAGAAGCTGAAATGTTCGTTCTCAAGATGTGGAGGATGCTTATTTTTGAAATAAAGAAGGTGGAGACAGGCCTTGCTTTGAGGTCAAAATCTTGA 2373 0.4378 MHVGLVSQGMPRFPHPYGTMVRPSFPPRPPGAVNVLPAVSRPPVAGIPPVRPVIPPVVRPVVAPNITPADKPQTTVYIGKIASTVENEFMLSLLQLCGPIKSWKRPQNPTNGTPLSFGFWEFDSAEGVLRALRLLNNLNVDGQELMVNPNDATKEYLEKYVKKKNENLQKDTQAVGSDKDDENAPPSNAKEDEKPDDSKKDDSKSGNKENHNATNLGIITDEDREADREALEKITNMIEERLKTRPLPPPPAQAAPDGAANSALEQPSKARDGDSDADTVNNEAGDDRNDKETNSENKATSEHDKPETPDRRHDRRSRERDRDRELKREKDRELERYEREAERERIRKEREQRRRIEEAERQYETCLKDWEYREREREKERQYEKEKEKERERKRRKEILYDEEDDDDDSRKRWRRSALDEKRKKRMREKEEDLADRQKEEEEIADAKRRAEEDQQLKQQRDALRLFSEHVNGGEKSMATEDMTNQAKNIVPQQDTVADHGYEGHIGDGNPLNGINDESTMASVAVSDARQSGNVPAKKLGFGLVGSGKRTTVPSVFHEDEEDDARKDKKMRPLVPIDYSTEELQAVQSTVSGAPPANLAAAAEFAKRLSNANIKEEKVDGDWDRIRRSSEKSNYRDRDRNDEDGSHNKDESREKISDRDRDRDRGLEKLKTSDNKKLLDAKQLIDMIPKTKDELFSYEINWAVYDKHHLHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLALRSKS 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1719 790 MobiDBLite consensus disorder prediction 630 667 - -
Prci10g1719 790 CDD RRM_RBM25 74 157 IPR034268 -
Prci10g1719 790 FunFam RNA Binding Motif protein homolog 669 785 - -
Prci10g1719 790 Gene3D - 67 182 IPR012677 -
Prci10g1719 790 Coils Coil 372 400 - -
Prci10g1719 790 Pfam PWI domain 713 776 IPR002483 GO:0006397
Prci10g1719 790 Coils Coil 421 457 - -
Prci10g1719 790 ProSiteProfiles PWI domain profile. 693 790 IPR002483 GO:0006397
Prci10g1719 790 SUPERFAMILY PWI domain 711 778 IPR036483 GO:0006397
Prci10g1719 790 MobiDBLite consensus disorder prediction 218 240 - -
Prci10g1719 790 SMART rrm1_1 75 148 IPR000504 GO:0003723
Prci10g1719 790 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 76 145 IPR000504 GO:0003723
Prci10g1719 790 MobiDBLite consensus disorder prediction 527 576 - -
Prci10g1719 790 SUPERFAMILY RNA-binding domain, RBD 47 152 IPR035979 GO:0003676
Prci10g1719 790 MobiDBLite consensus disorder prediction 374 460 - -
Prci10g1719 790 SMART pwi_2 706 779 IPR002483 GO:0006397
Prci10g1719 790 MobiDBLite consensus disorder prediction 167 208 - -
Prci10g1719 790 MobiDBLite consensus disorder prediction 554 576 - -
Prci10g1719 790 Coils Coil 320 369 - -
Prci10g1719 790 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 5 790 - -
Prci10g1719 790 MobiDBLite consensus disorder prediction 269 358 - -
Prci10g1719 790 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 74 152 IPR000504 GO:0003723
Prci10g1719 790 MobiDBLite consensus disorder prediction 167 358 - -
Prci10g1719 790 Gene3D PWI domain 669 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1719 Prci-Chr10 12685486 12692015 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1719 K12822 - gmx:100809428 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1719 10 12685486 12692015 Prci10g1719 10 12685486 12692015 ECH