Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1716 ATGAGGAGTTCCTTCTTCCTTCTCTTTATCCACTTATCATCCTTCTCTGCTGGCTTTGCCGGAGCCGTTGGAACCTCCGGCGATGATGTGGCTCGGGGTACAAACCCATTCACTCCTAAGGCATTCTTGATTCGGTATTGGGATAAGGAGATCCGGAACGGCCTGCCTAAGCCGGAGTTCTTGCTCTCTAAGGCGTCCCCATTGACCGCCGTGGACTCGGCGGCTTTTGCCAAGCTCGCCGCCAGCAACGCTCTTTCCACGCGCCTCCCGGAATTTTGCTCCTCCGCGAATCTACTCTGTTTTCCTGATTTGGGTCAGAGCCTGGAGAAGCACTCTAAGGATGTGAACTTTGCTGTGTACCGGAACAAGAACTTCACCAACTATGGGACGGATCGGCTCGGTGGGTTGGACTCGTTTAAGAACTATTCCGAAGGGGAGAATATTCCGGTGAACGATTTCAGGAGATACAGCCGCGACTCCACAGGCCATAAGGACAATTTCCTCAGCTATGCGAATGATGGCAACGTGGTCGACCAGGGCTTCCACACCTACGGCGCCGCAGCAACAGGCGGCGTCGGCGAGTTCAAGAAGTATGCCGATTCGACCAATGTCCCCAATCTCCAATTCACCTCCTACTCTGATGATGCCAACGGGAGAGAGCAATCGTTCACTAGCTACTCCGAGAACGGAAATGCTGGGGGCCAATCTTTCTCCAACTATGGAAAACACGGGAATGGGGCTGTGAGCGGTTTCTCAAGCTACGGGACGAACTCGAACGTCGCCGGGTCGGGATTCTCGAATTACGGTGAGACTGGGAATGCCGGGAATGAGACATTCAAGAATTACGGTGTGAATATGAACAATCCCACCAACACCTTCAAGAACTACGCCGGCGGCGGCAATGGAGCCACTGACAGTTTCGCTAATTACAGAGACCAAGCCAATGTCGGAGAGGATTCATTTCAATCATATGCTAAGAGTGCAAACGCAGCTGAAGTCGATTTCTCGAACTACGGCAAATCCTTCAACGAAGGGACAGATAAATTCACCGGCTACGGGAAGGGAGCTAACGAGCATAAAATTGGGTTCAAAGGCTACGGAGTGAACAATACCTTCAAGGACTACGCGAAAGACGGCGTCACATTCACAGGCTACACCAATGTGAGCACCGCTCTCAGTGCTTCCATGGCAAAATCTGGTTCTGCCATCAACGGCAATATGGTAAAAAGGTGGGTGGAACCAGGTAAATTCTTCCGCGAATCGATGCTGAAGCGAGGGACGGTGACGCCGTTCCCGGACATCAGAGATAAAATGCCCAAGAGGTCGTTTCTTCCCCGATCTATCATCTCCAAATTACCATTCTCGACCTCGAAAATCTCAGAGCTGAAGCAGATTTTCAAAGTGTCTGATAATTCCTCCATGGACCAGATCCTATCGAGCTCCCTCAGCGAGTGCGAGAGGACTCCGAGCCCCGGCGAGACCAAACGCTGCGTCGGCTCCATCGAGGACATGATCGACTTCGCGACGTCGGTGCTGGGGCGCAACGTCGTCGTTCGGACCACCCAGAACGTGAACGGGTCGAAGAAGAACGTGGTGGTGGGTCGGGTCCAGAAGATAAACGGGGGCCAGGTCACCCAATCCGTGTCGTGCCACCAGAGCCTCTTCCCTTACCTGCTCTACTACTGCCACTCCGTCCCCAAAGTTCGGGTCTACGAAGCGGATCTATTGGACCCGAAAAGCAAGGCCAAGATCAACCACGGTGTTGCCATCTGTCACCTGGATACCACCGCGTGGAGCCCCACCCATGGCGCGTTCCTCTCCCTCGGATCGGGTCCAGGTCGGATCGAAGTCTGCCACTGGATCTTCGAGAATGACATGACCTGGACCATCGCGGATTGA 1899 0.5366 MRSSFFLLFIHLSSFSAGFAGAVGTSGDDVARGTNPFTPKAFLIRYWDKEIRNGLPKPEFLLSKASPLTAVDSAAFAKLAASNALSTRLPEFCSSANLLCFPDLGQSLEKHSKDVNFAVYRNKNFTNYGTDRLGGLDSFKNYSEGENIPVNDFRRYSRDSTGHKDNFLSYANDGNVVDQGFHTYGAAATGGVGEFKKYADSTNVPNLQFTSYSDDANGREQSFTSYSENGNAGGQSFSNYGKHGNGAVSGFSSYGTNSNVAGSGFSNYGETGNAGNETFKNYGVNMNNPTNTFKNYAGGGNGATDSFANYRDQANVGEDSFQSYAKSANAAEVDFSNYGKSFNEGTDKFTGYGKGANEHKIGFKGYGVNNTFKDYAKDGVTFTGYTNVSTALSASMAKSGSAINGNMVKRWVEPGKFFRESMLKRGTVTPFPDIRDKMPKRSFLPRSIISKLPFSTSKISELKQIFKVSDNSSMDQILSSSLSECERTPSPGETKRCVGSIEDMIDFATSVLGRNVVVRTTQNVNGSKKNVVVGRVQKINGGQVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPKSKAKINHGVAICHLDTTAWSPTHGAFLSLGSGPGRIEVCHWIFENDMTWTIAD 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1716 632 ProSiteProfiles BURP domain profile. 417 631 IPR004873 -
Prci10g1716 632 SMART BURP_2 415 631 IPR004873 -
Prci10g1716 632 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 24 632 - -
Prci10g1716 632 Pfam BURP domain 417 629 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1716 Prci-Chr10 12660028 12662503 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1716 - - qsa:O6P43_033157 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1716 10 12660028 12662503 Prci10g1716 10 12660028 12662503 ECH