Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1701 ATGAGTACTGATGAAAAAGTAGCTGGGATTTCATCTTCCGGAATTGTGGATTCAAGTAGTTGGTGTCAGCTGGAAATTTGTTATCCAGTTTCCATGAAGCAAGCTATTCAATACTCCATAGATCATAAAGTTACCAAGTGTTCACCTTCTCCTGTACTCTCTTTTGTGGAGAGAGAGCCTCAAGATACAGAAACTTCTCATGTAACAGCTTTTCATTCAGAACATGGACGCCCAGAGTCAGGAAATGAGTCAACTTCATCTAAGACCATGCGAGATGTACATATTTCAATGAGATTAATGGAGGACTTTCTTGAGCTTGCTAAAGAAAATACAGAGAAGGATCTGGAAACATGTGGTATACTAGGTGGTTTTCGTGCAAAGGGAACCCTCTACATGACCACACTGATAATACCGAAGCAGGAATCAACTTCCAGTTCTTGTCAGGCTATGAACGAGGAGGAAGTTTTTGCAATTCTAAATGAGAGATCCCTTTTACCTGTGGGATGGATCCATACCCATCCTTCTCAAAATTGTTTCATGTCATCCGTGGATCTGCACACTCAATATTCTTATCAGGTAATGGTTCCTGAGGCTTTTGCCATTGTCCTGGCTCCTAAAGACACCTCAAGGAGCTGTGGACTCTTCCGGATAACTGACCCTGATGGAATGAGCATTCTTAAAGGTTGCCAAGATACAGGATTTCATGCCCACAAAGACCCAGATAGTGGAAATCCCATGTACGAGACATGCTCCAATGTCTACAAAAACTCCAATATGAGGTTTGAAATCTTTGACTTGCGCTGA 804 0.4192 MSTDEKVAGISSSGIVDSSSWCQLEICYPVSMKQAIQYSIDHKVTKCSPSPVLSFVEREPQDTETSHVTAFHSEHGRPESGNESTSSKTMRDVHISMRLMEDFLELAKENTEKDLETCGILGGFRAKGTLYMTTLIIPKQESTSSSCQAMNEEEVFAILNERSLLPVGWIHTHPSQNCFMSSVDLHTQYSYQVMVPEAFAIVLAPKDTSRSCGLFRITDPDGMSILKGCQDTGFHAHKDPDSGNPMYETCSNVYKNSNMRFEIFDLR 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1701 267 Gene3D Cytidine Deaminase, domain 2 71 267 - -
Prci10g1701 267 CDD MPN_AMSH_like 91 267 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Prci10g1701 267 FunFam AMSH-like ubiquitin thioesterase 2 73 267 - -
Prci10g1701 267 PANTHER AMSH-LIKE PROTEASE 35 267 - -
Prci10g1701 267 SMART pad1_6 92 220 IPR000555 GO:0005515|GO:0008233|GO:0008237
Prci10g1701 267 MobiDBLite consensus disorder prediction 58 89 - -
Prci10g1701 267 MobiDBLite consensus disorder prediction 60 81 - -
Prci10g1701 267 ProSiteProfiles MPN domain profile. 93 223 IPR037518 -
Prci10g1701 267 SUPERFAMILY JAB1/MPN domain 93 221 - -
Prci10g1701 267 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 89 196 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1701 Prci-Chr10 12507939 12513022 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1701 K11866 - gmx:100807282 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1701 10 12507939 12513022 Prci10g1701 10 12507939 12513022 ECH