Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1656 ATGTTGGGGGCCAACAATGGAAATCCTGTTCTTCCTGGTTTCCTGGACAATGCCCACATGCAATACCAAGCTAATGCAGCAAATCAACTGCAGTTGTTTGGAAACTTACCTGCTGGGTGTAGTGTTGATCCAGTTAATTACTTTGGAAATGAGCATATTAGTTCCATGGTTCGGCCAAGCAGACAAAATAGGGAAATGGATGACATGTGCAAACAGCAAAGGCTTCAGATTTCCTTAAATTACAACTTCTGTCAAGATGAACCTGCTCGATCAGCAAGTATTCCAAACCCAAACGCAAATCCAAATCCCGTCTCAACAGGATTGAGGTTGTCTTATGATGATGATGAACGCAACTCATCTGTCACTTCTGCAAGTGGAAGCATGACTGGTGCACCTTCAATCATTTTATCCCTTGGTGACAATATTAAAACTGAGCTTGACAGGCAGAAGCAAGAACTGGACCAGTATATTAAACTTCAGAAGGAACAATTGTCAAAAGGATTGAGAGACATGAAACAAAAGCACATGGCATCTCTTCTTACTGCCATTGACAAAGGTGTAAGCAAGAAGCTAAGGGAAAAAGATGTGGAGATAGAGAACATGAACCGTAGAAACCGAGAATTAGCAGAGAAAATAAAGCTGGTAGCCATGGAAGCACAAAACTGGCATTACAGAGCAAAGTACAATGAGTCGGTCGTGAATGTTCTAAGGAACAATCTCCAGCAGGCCATCTCACAGGGAGCTGAACAAGGGAAAGAAGGGTTTGGGGACAGCGAGGTTGATGATGCTGCGTCGGCCATTGACCCCAATAACTTGCTGAGCATCCATGGTGTTCCCATGAGATCTACTGGCAAGCAGCAGCGAGGCATGGATGATGCCATGATTTGCCGGGCATGCAAGGCGAAGGAGGTTTCAATGTTGTTAATGCCTTGTAGGCACCTGTGCTTGTGTATGGAATGTGATGCTTATGTCAATGTTTGCCCTGTATGCCAAATGATGAAATCTGATAGTGTCCAAGTGTATCTTTCTTAA 1032 0.438 MLGANNGNPVLPGFLDNAHMQYQANAANQLQLFGNLPAGCSVDPVNYFGNEHISSMVRPSRQNREMDDMCKQQRLQISLNYNFCQDEPARSASIPNPNANPNPVSTGLRLSYDDDERNSSVTSASGSMTGAPSIILSLGDNIKTELDRQKQELDQYIKLQKEQLSKGLRDMKQKHMASLLTAIDKGVSKKLREKDVEIENMNRRNRELAEKIKLVAMEAQNWHYRAKYNESVVNVLRNNLQQAISQGAEQGKEGFGDSEVDDAASAIDPNNLLSIHGVPMRSTGKQQRGMDDAMICRACKAKEVSMLLMPCRHLCLCMECDAYVNVCPVCQMMKSDSVQVYLS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1656 343 Coils Coil 191 218 - -
Prci10g1656 343 CDD mRING-HC-C3HC5_CGRF1-like 295 330 - -
Prci10g1656 343 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 279 342 - -
Prci10g1656 343 Coils Coil 143 163 - -
Prci10g1656 343 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 343 IPR013083 -
Prci10g1656 343 PIRSF SBP1_RNase_bind 1 343 IPR017066 -
Prci10g1656 343 Pfam Zinc finger, C3HC4 type (RING finger) 294 332 - -
Prci10g1656 343 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 68 340 IPR017066 -
Prci10g1656 343 MobiDBLite consensus disorder prediction 88 126 - -
Prci10g1656 343 ProSiteProfiles Zinc finger RING-type profile. 296 331 IPR001841 -
Prci10g1656 343 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1656 Prci-Chr10 12204865 12209203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1656 286 343 Miscellaneous Gene Families AT4G39050 34.483 4.64e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1656 K19042 - mnt:21410357 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1656 10 12204865 12209203 Prci10g1656 10 12204865 12209203 ECH