Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1606 ATGGCGAGGAACGAAGCAAAAGTTCCATTGCTTGAAGATAGACAAGATGATGATTTGGACCTTGCACGAAGGGTTTGGGTTGAATCAAAGAAGCTCTGGCACATCGTAGGCCCTGCAATCTTCAGCCGTGTAGCTTCCTATTCCATATTAGTCATCACCCAAGCCTTCGCCGGCCATCTCGGTGACCTTGAACTTGCTGCCATCTCCATCGTCAACAATGTCATTCTGGGATTCGACATCGGCCTCATGTTGGGTATGGCTAGTGCCTTAGAAACACTGTGCGGGCAAGCTTTTGGGGCCAAGAAGTACTACATGATGGGGATTTACCTTCAACGTTCATGGATCGTTCTTTCCATGTGCTGTGTTCTGCTCTTGCCTTTGCTTCTGTTTGCGTCACCAATCTTGAAACTTCTTGGTGAGCCTGAGGATTTAGCAGAGCTATCAGGGGCTGTTGCTTTGTGGATGATACCGCTTCACTTCAGCTTCGCATTTCAATTTCCTCTTTGGAGGTTCTTGCAGTGCCAGCTCAAGCCTGGAGTGATTGCTTGGGTGTCTCTAATCGCAGTTGTAGCGCACGTAGTTGTGAGCTGGCTGTTTGTGTACAAGTTTCAAGCCGGAGTGATTGGCACAGCCGCCACGATGAATATCTCTTGGTGGGTTTTGGATCTAGGTCTCATGTTTTACTGTGTTTGTGGAGGTTGTCCTCTCACGTGGTCTGGTTTTTCCATGGAAGCTTTTTCTGGTATATGGGAATTCCTGAAACTATCTGCTGCTTCTGGTGTCATGCTCTGCTTGGAGAACTGGTACTACAGAATACTGATATTGATGACTGGGCATCTGGAAAATCCAGAGATTGCCGTCGATGCGTTGTCTATATGCATGGCCATAAATGGATGGGAAATGATGATTCCTCTTTCATTCTTTGCTGCAACTGGAGTCAGGGTGGCAAATGAGCTGGGTGCTGGGAACGGAAAGGCAGCCAAGTTTGCAACAACGGTGTCAGTGGTGACGTCAACCATAATAGGCGTGGTGATATGTGTCTTCATTATGATCTTTCACAACCAAATCGGTGATATATTCTCTCCAAGCAAACCCGTGCTTGATCAAGTTAACAAGCTCTCTCTTCTCTTAGTTTTCACCATACTTCTCAACAGTGTTCAACCAGTTCTCTCAGGAGTGGCTGTGGGGTCAGGGTGGCAGTCCTACGTGGCATACATAAACTTGGGTTGCTACTATATCATTGGTTTGCCTCTTGGAATTTTGATGGGCTGGGTCTTCCATCTAGGGGTCATGGGTATCTGGGCAGGGATGATTTTTGGTGGGACTGCAACTCAAACCTTAATATTGGCACTCATCACCAGTCGCTGCAATTGGGACAGAGAGGCTGAGAAAGCGAGCTGGCACGTCAAGGATTTGGAAGATCAGATCTGA 1431 0.4738 MARNEAKVPLLEDRQDDDLDLARRVWVESKKLWHIVGPAIFSRVASYSILVITQAFAGHLGDLELAAISIVNNVILGFDIGLMLGMASALETLCGQAFGAKKYYMMGIYLQRSWIVLSMCCVLLLPLLLFASPILKLLGEPEDLAELSGAVALWMIPLHFSFAFQFPLWRFLQCQLKPGVIAWVSLIAVVAHVVVSWLFVYKFQAGVIGTAATMNISWWVLDLGLMFYCVCGGCPLTWSGFSMEAFSGIWEFLKLSAASGVMLCLENWYYRILILMTGHLENPEIAVDALSICMAINGWEMMIPLSFFAATGVRVANELGAGNGKAAKFATTVSVVTSTIIGVVICVFIMIFHNQIGDIFSPSKPVLDQVNKLSLLLVFTILLNSVQPVLSGVAVGSGWQSYVAYINLGCYYIIGLPLGILMGWVFHLGVMGIWAGMIFGGTATQTLILALITSRCNWDREAEKASWHVKDLEDQI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1606 476 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 458 - -
Prci10g1606 476 CDD MATE_eukaryotic 28 464 IPR045069 GO:0042910|GO:1990961
Prci10g1606 476 Pfam MatE 38 198 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci10g1606 476 Pfam MatE 260 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci10g1606 476 NCBIfam MATE family efflux transporter 38 434 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1606 Prci-Chr10 11562070 11566238 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1606 K03327 - qsa:O6P43_025232 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1606 10 11562070 11566238 Prci10g1606 10 11562070 11566238 ECH