Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1474 ATGGGGAAGAAGAAACCAAAGGAGCCCGAGGAAACCCCTGAAACCAACGAAACTTCCGACCTATTTGGCAAGCTATTTGGTAATGTCTCGGAACAGGGCGCCAGCTCTTCTCTATTCTCAGATAGCAACCCCTTTCGGAAGAAGCCTCTTGAAACTAGTTCAAGTTTTGGCCTAACCAATAGTACTGAAAACGCTCCCGATTCTGAAGAGCTGAAGAAGAGGAAGAGAAGCAGAGAGAAGAACTCGTCTGTTGATTCAGATAGTGCCCTTGAGGCTTCGGAGAAGAAGTCGAAATCTGGTTCCGGCTTCAACCCTCGTTCGAATCCTCAACCGAATAGAATAGCGCAGGACGACGAGACCAAAGTGTCTGTTTCGGGTGCGCATGCGACTACATTGTCGAAGAAAGAAAATATTGTGTCTACGGAAGGTGAGGAGAAAGGTGAGCTTGTGAATGACGACAAGGAGAAGAGAAGGAAGAGCAAGAGAAAAAGAGATGACGTTGAGAAAGAGTGGGAATTGAAGAGGTATGGGGCAGTGGAGGAAGAGCGAGATGACGGGGAAGGCTTGGGGAAGAATGTTGTTGGGACCAAAAGGAAGACGTTGGATAATCCTGCCGACATGTTGGTAACAAATGAAGGTTTTGATGATGAGAATAAGCTCTTAAGAACCATATTTATTGGGAATTTACCCCTCAAGGTGAAAAAGAAGACTTTACTGAAAGAGTTTAAGAAATTTGGGGAGGTTGAATCTGTGAGGATTCGTTCTGTTCCAATATTAGATACCAAAAAACCTAGAAAGGGTGCCATCCTTTCGAAGAAAATCAATGATGCTGGTGATAGTGTTCATGCATACGTTGTTTTTAAGACAGAGCAGTCGGCACAGGATTCTTTGTCCCATAACATGACTGTGGTTGGAGGAAATCACATTCGTGTTGATAGAGCATGCCCACCTCGCAAGAAACATAAAGGAGAGCATGCTTCACTGTATGATAACAAGAGAACTGTTTTTGTTGGCAACCTCCCATTTGATGTAAAGGATGAAGAACTTTATAAACTATTTTCTGGTGTATCCAAGCTGGAATCCAGCATAGAAGCTGTTAGAGTCATTAGAGATCCTCATTTGAATCTTGGGAAGGGTATCGCCTATGTGCTTTTTAAAACAAGGGAAGCTGCTAATTTTGTTCTCAGGAAACGGAACTTGAAGCTTCGAGACCGAGATCTGAGACTTAGTCATGCGAGAGCAGATGCCACCCCATCCAAAAGGCCAAACTTTTCACCGCCACAAGTTTCTGGTACTCCTGCCAAGAAGGCAGCCATGGCTTTAAGGTCTCCCTCAAGCAGTAATAACAGCACTAATAAAAAATTCAATATGTCTTACCAAGGTTTGCGGGCAAACAAAACTGTGGTCCATAAGAAATCAAGAACTCACGGAGGTAAGCAAACGACAGAGCGCAAGACGAAGAGACCAGCAGTTGCTGCCAGAAAGGCTAAACTAAACGCAAAGTTGCTCAAGGAAGACGGTTCAGCAAAACAAGGAGGAAGAAAACGCAAGCTTGATAGTAAAACTCCAGATAGTTTTGTACGAAACAAGAAAATTAAGAATAGCTAG 1608 0.4372 MGKKKPKEPEETPETNETSDLFGKLFGNVSEQGASSSLFSDSNPFRKKPLETSSSFGLTNSTENAPDSEELKKRKRSREKNSSVDSDSALEASEKKSKSGSGFNPRSNPQPNRIAQDDETKVSVSGAHATTLSKKENIVSTEGEEKGELVNDDKEKRRKSKRKRDDVEKEWELKRYGAVEEERDDGEGLGKNVVGTKRKTLDNPADMLVTNEGFDDENKLLRTIFIGNLPLKVKKKTLLKEFKKFGEVESVRIRSVPILDTKKPRKGAILSKKINDAGDSVHAYVVFKTEQSAQDSLSHNMTVVGGNHIRVDRACPPRKKHKGEHASLYDNKRTVFVGNLPFDVKDEELYKLFSGVSKLESSIEAVRVIRDPHLNLGKGIAYVLFKTREAANFVLRKRNLKLRDRDLRLSHARADATPSKRPNFSPPQVSGTPAKKAAMALRSPSSSNNSTNKKFNMSYQGLRANKTVVHKKSRTHGGKQTTERKTKRPAVAARKAKLNAKLLKEDGSAKQGGRKRKLDSKTPDSFVRNKKIKNS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1474 535 MobiDBLite consensus disorder prediction 95 137 - -
Prci10g1474 535 SUPERFAMILY RNA-binding domain, RBD 216 322 IPR035979 GO:0003676
Prci10g1474 535 CDD RRM2_RBM34 334 410 IPR034221 -
Prci10g1474 535 MobiDBLite consensus disorder prediction 498 535 - -
Prci10g1474 535 MobiDBLite consensus disorder prediction 1 167 - -
Prci10g1474 535 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 222 316 IPR000504 GO:0003723
Prci10g1474 535 MobiDBLite consensus disorder prediction 411 535 - -
Prci10g1474 535 SUPERFAMILY RNA-binding domain, RBD 329 429 IPR035979 GO:0003676
Prci10g1474 535 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 313 475 - -
Prci10g1474 535 MobiDBLite consensus disorder prediction 441 463 - -
Prci10g1474 535 MobiDBLite consensus disorder prediction 138 167 - -
Prci10g1474 535 MobiDBLite consensus disorder prediction 16 65 - -
Prci10g1474 535 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 335 406 IPR000504 GO:0003723
Prci10g1474 535 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 224 266 IPR000504 GO:0003723
Prci10g1474 535 Gene3D - 326 421 IPR012677 -
Prci10g1474 535 MobiDBLite consensus disorder prediction 66 94 - -
Prci10g1474 535 CDD RRM1_RBM34 222 312 - -
Prci10g1474 535 SMART rrm1_1 334 410 IPR000504 GO:0003723
Prci10g1474 535 SMART rrm1_1 223 312 IPR000504 GO:0003723
Prci10g1474 535 Coils Coil 150 170 - -
Prci10g1474 535 Gene3D - 127 325 IPR012677 -
Prci10g1474 535 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 333 414 IPR000504 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1474 K14837 - gmx:100784494 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1474 10 9977811 9981790 Prci10g1474 10 9977811 9981790 ECH