Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1464 ATGTCGCAAATAAAAACTGTTAAAGTCAGTAATCTTTCCCTGGGAGCAACTGAACAAGACATTAAGGAATTTTTTTCTTTTTCTGGTGATATTGAATATGTTGAACTGAGGAGTCATGATGAACGATCTCAAATTGCTTATGTCACCTTCAAGGATGCACAAGGAGCTGAGACTGCTGCACTACTATCGGGAGCAACAATAGTTGATTCGTCGGTTACAGTAACTTTGGATCCAGATTACGAGCTTCCACCAGCTGCTTTGACATCACCTGTAACTGAAAGTAAGGCTCCTGGTGGTGCTGAATCTGCTTTTAGAAAGGCAGAGGATGTTGTCACCGGCATGCTGGCCAGGGGCTTTGTCTTGGGGAAAGATGCTGTCAGCAAAGCGAAGACATTTGATGAAACGCATCATTTATCATCAACTGCCTCAGCAAAAGTTGCATCTTTTGATCAGAAAATTGGTTTCAGTGAGAAAATAACTGCTGGTGCTTCAGCCATGAGTGATCGAGTTCGAGAAGTTGATCAAAAGTTTCAGGTTTCAGAAAAAACCAAAACAGCATTTGCAGCTGCCGAACAGAAGGTCAATGAAGCAGGTTCTGCTATCATGAAAAATCGCTATATACTCACTGGGGCATCGTGGGTGACAGGTGCTTTCAGTAAGGTTGTTAAGGCAGCTGAGGATGTAGGACAGAAGACAAAGGAGAAAGTGCACAATACAGAGGAGGAACGGAAGCAAAAGGATCAGCATGCTCAGGTCCTCTCTGAGCCACCAGCAGCAGCACCAGCAACGGGTTCACAGAACCCGTCTAAGTCTTCTCCTGAGGGTTTGATCCTTTAA 837 0.4432 MSQIKTVKVSNLSLGATEQDIKEFFSFSGDIEYVELRSHDERSQIAYVTFKDAQGAETAALLSGATIVDSSVTVTLDPDYELPPAALTSPVTESKAPGGAESAFRKAEDVVTGMLARGFVLGKDAVSKAKTFDETHHLSSTASAKVASFDQKIGFSEKITAGASAMSDRVREVDQKFQVSEKTKTAFAAAEQKVNEAGSAIMKNRYILTGASWVTGAFSKVVKAAEDVGQKTKEKVHNTEEERKQKDQHAQVLSEPPAAAPATGSQNPSKSSPEGLIL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1464 278 Gene3D - 2 75 IPR012677 -
Prci10g1464 278 MobiDBLite consensus disorder prediction 227 250 - -
Prci10g1464 278 FunFam RNA recognition motif-containing protein 1 75 - -
Prci10g1464 278 SUPERFAMILY RNA-binding domain, RBD 5 84 IPR035979 GO:0003676
Prci10g1464 278 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 5 79 IPR000504 GO:0003723
Prci10g1464 278 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 4 241 - -
Prci10g1464 278 Coils Coil 222 242 - -
Prci10g1464 278 MobiDBLite consensus disorder prediction 260 278 - -
Prci10g1464 278 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 67 IPR000504 GO:0003723
Prci10g1464 278 MobiDBLite consensus disorder prediction 227 278 - -
Prci10g1464 278 SMART rrm1_1 6 75 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1464 Prci-Chr10 9852496 9856292 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1464 - - pcin:129321518 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1464 10 9852496 9856292 Prci10g1464 10 9852496 9856292 ECH