Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1431 ATGCAGAAACTGGGCGAGTTCAAGCTACCTCACTTTTTCAATTATCCACCATACTTCACTTTGCAGCCTGTGAGAGACACGAGAGAGAAGCAAGTACAGTTGTGGAAAGATCTTATTCTAGATTACTGCAAAACGCAGAAGATATTTGTGGTTGGTCTTGAAGAAGAATTCCCTCTATTTTCAAATCCTGCCATTGAAAGGTCTCTTAGTCATGAAGCCAGAGAAGCCTTCCTGTCTGCATTAGTTTCAGAAGGACGAGCTGAATGGATGGATAAAGGACGAAAAAAATGTCTTATTCTCTGGCACCGGATTCAAGATTGGGTTGACATTATTGTACAGTTTGCGAAGGATAATGGATTGGAGGACGGTGTTGTGACAATAGAGGAATTATGCTCAGGGACTGAATCTCAAGGAACAGAGCTTCATGGGATAGATCGCACCATCTTGAATCGTGCTTTGAAGCTGTTAGAACAGAAGGGGAAGCTTGTCATCTTCAAGGGAACTTCAGCTGATGATGAAGGAATTACATAG 531 0.4218 MQKLGEFKLPHFFNYPPYFTLQPVRDTREKQVQLWKDLILDYCKTQKIFVVGLEEEFPLFSNPAIERSLSHEAREAFLSALVSEGRAEWMDKGRKKCLILWHRIQDWVDIIVQFAKDNGLEDGVVTIEELCSGTESQGTELHGIDRTILNRALKLLEQKGKLVIFKGTSADDEGIT 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1431 176 Pfam ESCRT-II complex subunit 13 145 IPR008570 GO:0000814|GO:0071985
Prci10g1431 176 FunFam Vacuolar protein sorting-associated protein 25 5 100 - -
Prci10g1431 176 Gene3D - 4 101 IPR014041 -
Prci10g1431 176 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 2 175 IPR008570 GO:0000814|GO:0071985
Prci10g1431 176 SUPERFAMILY "Winged helix" DNA-binding domain 102 169 IPR036390 -
Prci10g1431 176 SUPERFAMILY "Winged helix" DNA-binding domain 7 107 IPR036390 -
Prci10g1431 176 FunFam vacuolar protein-sorting-associated protein 25 100 176 - -
Prci10g1431 176 Gene3D - 103 176 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1431 Prci-Chr10 9580971 9584359 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1431 K12189 - gmx:100803388 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1431 10 9580971 9584359 Prci10g1431 10 9580971 9584359 ECH