Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1353 ATGCCTCAAGAGCAGCCGGGGTTCATCCGAAGGAGCTTGTCAAGAAGGCGCTCCTTAAGGTCTGGGGTAGATACGGATGACAGGGGGTGGACCTCACTTCATGTTTGCGCTCGCAAAGGAGATCTCAAATTGGTTAAGAAGCTTATCAATGAAGGAATGGATGTAAATGTTGTCGCATGGGGTCCAAAATCAAAAGGTGTCACCCCGCTTCATCTTGCTGCTGAAGGTGGCCACCTTCAAGTCATGGATGAATTACTTGAACGTGGTGCAGATATTGATGCCAGGACTAAGGGTGCTTGTGGCTGGACACCTCTCCACATTGCAGCTAAAGAAAGGAGGAAGGCAGCGGTGAAATTATTGGTAGAGAATGGAGCATTCTTGCCTCCTGATATCAACGATTGCAGATTTAACCCCCCAGTTCATTATTGCCCAGGCCTTGAATGGGCCTATGAGGAGATGAAGCGACTTCGATATGAAAACTCATCATCATCTGGGGACACCTCTTGCGGCTCAGAAAGCTGA 522 0.4866 MPQEQPGFIRRSLSRRRSLRSGVDTDDRGWTSLHVCARKGDLKLVKKLINEGMDVNVVAWGPKSKGVTPLHLAAEGGHLQVMDELLERGADIDARTKGACGWTPLHIAAKERRKAAVKLLVENGAFLPPDINDCRFNPPVHYCPGLEWAYEEMKRLRYENSSSSGDTSCGSES 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1353 173 Pfam Ankyrin repeats (3 copies) 21 95 IPR002110 GO:0005515
Prci10g1353 173 ProSiteProfiles Ankyrin repeat region circular profile. 100 125 - -
Prci10g1353 173 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
Prci10g1353 173 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Prci10g1353 173 PRINTS Ankyrin repeat signature 116 130 IPR002110 GO:0005515
Prci10g1353 173 PRINTS Ankyrin repeat signature 66 81 IPR002110 GO:0005515
Prci10g1353 173 Gene3D - 16 164 IPR036770 -
Prci10g1353 173 ProSiteProfiles Ankyrin repeat profile. 100 125 IPR002110 GO:0005515
Prci10g1353 173 SUPERFAMILY Ankyrin repeat 25 143 IPR036770 -
Prci10g1353 173 SMART ANK_2a 65 94 IPR002110 GO:0005515
Prci10g1353 173 SMART ANK_2a 100 133 IPR002110 GO:0005515
Prci10g1353 173 SMART ANK_2a 28 57 IPR002110 GO:0005515
Prci10g1353 173 Pfam Ankyrin repeat 100 125 IPR002110 GO:0005515
Prci10g1353 173 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 26 141 - -
Prci10g1353 173 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Prci10g1353 173 ProSiteProfiles Ankyrin repeat region circular profile. 28 57 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1353 32 155 Acyl Lipid Metabolism Gene Families AT5G53470 33.871 4.87e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1353 - - aprc:113868977 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1353 10 9029913 9032554 Prci10g1353 10 9029913 9032554 ECH