Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1351 ATGGATGCAATAAGGAAGCAGGCTAGCAAATTAAGGGAGCAAGTTGCCAAGCAGCAGCAGGCTATACTTAGACAACTAGGCCAAATTAGCAATGAACCGCTTATAACAGACGAATCAGAAGTTCAATGTCACCAACAACTGCGAAAATTATACAATTCTACTAAGGTAGCCAAGAATTTTCAGCGGCATATTGTGCGTGGTATTGAAGGTTTAACCTCTGTTAGTTCAAAGCAGATGGAGATAGTAAGGAAGTTGGCAAAAGAATGTTGTAAGTACGGGACTGAGAATGAAAGCAGTAAATATCCTCTTGCAAGGGCTTCTCTTCACATGGGTAACTCATATGATTTAATGCAAAATGAAAGGGAGACTTTGCTTGCAATCTACAGTCATCAGGTCTCTGAGCCATTACGGGCACAAATTACAGGAGCTCCTTTAGAGGATGCACGCCACCTTGCTTATCGCTATGACAAACTTTTTCAAGAGGTAGAAGCTCAGGCTGCTGAAGTTTTGAGGCGTCGATCAAAGTTGAGGGATTCTTCTGTTTCTGCAGAGAACTCCATGAAGCTTCAAAATGCAGAGGCAAGGTTGAAAGAACTTAAATCAGCCTTGGTAGCGCTTGGTAGAGAAGCAACTGCTGCTATGGTGTCAGTTGAAGATCAACAACAACAGATAACTCTTAAGAGCCTTCATACAATGGTGGATGCTGAGAGAGCTTATCATGAGCATGCCCTTGTTATTTTAGAGAAGCTTTATTCTGAGATGATTCTGGAGAAGCAATCAAAGGAGTCTCCTGCCATTCCAGTGCCAAGAGATGGATACAATCAACCTGTATCTGAGAATGCTAATCTGAATGGTTTTGATCATCAAAGCACCAATCCGATGGGCACCTATTATTTTGCGAAGGTGGTACACCCATTTGATGCTCAAGCTGAGGGAGAGTTAAGTTTATCAGTTGATGATTACGTTGTAGTTCGGCAGGTTTCTCCCCATGGATGGTCTGAAGGATTATGCAAAGGCGATGCTGGATGGTTTCCCTCAGCATATGTAGAGAGACAGGACAAAATACCAGCGAGCACGATAATGGAGATAACTTCAACATCTTGA 1104 0.4257 MDAIRKQASKLREQVAKQQQAILRQLGQISNEPLITDESEVQCHQQLRKLYNSTKVAKNFQRHIVRGIEGLTSVSSKQMEIVRKLAKECCKYGTENESSKYPLARASLHMGNSYDLMQNERETLLAIYSHQVSEPLRAQITGAPLEDARHLAYRYDKLFQEVEAQAAEVLRRRSKLRDSSVSAENSMKLQNAEARLKELKSALVALGREATAAMVSVEDQQQQITLKSLHTMVDAERAYHEHALVILEKLYSEMILEKQSKESPAIPVPRDGYNQPVSENANLNGFDHQSTNPMGTYYFAKVVHPFDAQAEGELSLSVDDYVVVRQVSPHGWSEGLCKGDAGWFPSAYVERQDKIPASTIMEITSTS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1351 367 Gene3D Arfaptin homology (AH) domain/BAR domain 36 257 IPR027267 -
Prci10g1351 367 Coils Coil 1 21 - -
Prci10g1351 367 SUPERFAMILY SH3-domain 287 356 IPR036028 GO:0005515
Prci10g1351 367 SMART SH3_2 298 353 IPR001452 GO:0005515
Prci10g1351 367 Coils Coil 182 209 - -
Prci10g1351 367 Pfam Variant SH3 domain 302 350 IPR001452 GO:0005515
Prci10g1351 367 PANTHER SH3 DOMAIN-CONTAINING 18 352 - -
Prci10g1351 367 Coils Coil 159 179 - -
Prci10g1351 367 Gene3D SH3 Domains 297 352 - -
Prci10g1351 367 SUPERFAMILY BAR/IMD domain-like 42 254 IPR027267 -
Prci10g1351 367 ProSiteProfiles Src homology 3 (SH3) domain profile. 295 354 IPR001452 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1351 Prci-Chr10 8995012 9000231 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1351 - - pcin:129321227 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1351 10 8995012 9000231 Prci10g1351 10 8995012 9000231 ECH