Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1314 ATGGCGAGTGATTCCGGCACAAAACCTCCCCTTGCTTCGTCTTCAGCTGCGGCGGAATCCTACATTGGGAGCTTTATCAGTCTTGTTTCCAAGTACGAGATTCGTTACGAAGGCGTTTTGTATCACCTCGACGTCCGGGATTCCACCATTGGCTTGAAGAGCGTCAAGTCTTATGGAACAGAGGGGAGAAGAAAAGATGGTCCACAAGTTCCTCCAAATGACAAGGTTTATGAATACATTCTTTTTCGAGGGAGTGACATTAAGGATTTGCAGGTCAAGTCCCTCTCTACATCTATCAAAGAAGAGCAGATATTCAGTGATCCAGCTATTATTCAGTCACAATATTCTGAAGTGCCTTCAAGTTCTCCTATCGCTTCAGTGGCTGGGAGTGGTTTGACAGAATCAATTCAAAGGCAAGATACTCCTGCTATGATCAGTAGAGTCATTCCTCTTTCTGTTGGGTTGCCTTCCCATCGACCTGCAACATTGACGGACCCATCAAGTCAATCTGCTGTTACTCATGTTTCTGGTGCTCCTTCTTTCTCTATGGCAATGTATTGGCCAGAATATAGTGGGATATCAGGAGGTAGCTCTCATTCTCTGCTGCAATCTGGTCCTTTTCAGTCCTCTCCAGCAGTGGCACCTTTAAATGTACAGAGCTGGGGGCGAACTCCAGAAAGTCAGTTAACTTCTTCAAAAGTGGGCTGGACTACTATATCAGAGCATGGTGAAACTGTGTCATCCGTTACTGCTTCATCTCTTGTAAATCCGTCTTATGAACCTTCATCTTCCTCTTTACAAACTTCTAATTCTCTGGATGCTCCATCTCTTTTGTCTTCTAAGGCGCCATTACCCTATCGTTCTTCTATGGCTGAATCAAACATGCCTTTATTTTCTTCACCGATTCAAGGCATAAATCCTGTCAAAGATCAATTTTCTGGCAAAATTTCTCCTTACATGGGATCAATGTTTCCTGGACAATCTGCCCATCATTCTGTTTCATCATCAGTTGATTCTACTTCGAGCTCCTTGCCAAGACCTCCATCTTTTTTAACTCCAGATCAGTTTGCACATTCTAGACAGAATTTTGTTTCTTTAGCGCAGAACCAGATCCCTGGTCGTAATCATATGGTTTCTCTGCCACCAACATCCTCTAGCTCCTCTTTTTTAGCACCTTCTCCAGAATTTCAAGCAGCATTGTTGCCTTCACCACCATTGCCAACTTCAGTGCGCAAGCCTGAGCACTCAGCTTCACAGTTCAGTGAGGAGTTTGATTTTGAGGCCATGAATGAGAAGTTCAAAAAGGATGAAGTATGGGGTTCTCTTGGGAGGGCATCTAAGACAATAGAAAGGTTGGAGGATAATACTCCAACTAATGGCTTGGGTGACAGAGAGTGTCGTGGTTGA 1407 0.4407 MASDSGTKPPLASSSAAAESYIGSFISLVSKYEIRYEGVLYHLDVRDSTIGLKSVKSYGTEGRRKDGPQVPPNDKVYEYILFRGSDIKDLQVKSLSTSIKEEQIFSDPAIIQSQYSEVPSSSPIASVAGSGLTESIQRQDTPAMISRVIPLSVGLPSHRPATLTDPSSQSAVTHVSGAPSFSMAMYWPEYSGISGGSSHSLLQSGPFQSSPAVAPLNVQSWGRTPESQLTSSKVGWTTISEHGETVSSVTASSLVNPSYEPSSSSLQTSNSLDAPSLLSSKAPLPYRSSMAESNMPLFSSPIQGINPVKDQFSGKISPYMGSMFPGQSAHHSVSSSVDSTSSSLPRPPSFLTPDQFAHSRQNFVSLAQNQIPGRNHMVSLPPTSSSSSFLAPSPEFQAALLPSPPLPTSVRKPEHSASQFSEEFDFEAMNEKFKKDEVWGSLGRASKTIERLEDNTPTNGLGDRECRG 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1314 468 Gene3D - 12 97 - -
Prci10g1314 468 MobiDBLite consensus disorder prediction 327 346 - -
Prci10g1314 468 SMART LSM14_2 15 115 IPR025609 -
Prci10g1314 468 SUPERFAMILY Sm-like ribonucleoproteins 20 93 IPR010920 -
Prci10g1314 468 ProSiteProfiles Sm domain profile. 13 96 IPR047575 GO:0003723
Prci10g1314 468 PANTHER SCD6 PROTEIN-RELATED 16 449 - -
Prci10g1314 468 Pfam FDF domain 419 450 IPR019050 -
Prci10g1314 468 CDD LSm14_N 21 92 IPR025609 -
Prci10g1314 468 ProSiteProfiles DFDF domain profile. 412 448 IPR025762 -
Prci10g1314 468 Pfam Scd6-like Sm domain 21 94 IPR025609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1314 Prci-Chr10 8732200 8742477 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1314 K18749 - gmx:102669894 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1314 10 8732200 8742477 Prci10g1314 10 8732200 8742477 ECH