Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1306 ATGGCAGCAACTAGGGTTTTTGGAGCATATAGTAGAGCGTTGATGGCGGCGGCGGCGAAGGGGGCTGCGTCCGGTGTTAAGACTGCAGCGAAGACGGCCACACCGAAAGGTCGAGGCGGCAACGCTTTACAGAAGGTGATCCCTGTCTCTCCGCAGCTCGGAAAGTTTCTCGGTGCCTCTGAAGCTTCGCGCACCGATGCCGTCAAGAAAGTGTGGGATTACATCAAACTTCACAACCTTCAGAATCCTACAAATAAGAAGGAAATTGTTTGCGACGAGAAGTTGAAGGCCCTTTTTCCTGGGAAAGATAGGATATCGTTCACAGATATTGCCAAATGCCTTTCTAACCATTTTGTGAAATCAGGCTGA 369 0.5014 MAATRVFGAYSRALMAAAAKGAASGVKTAAKTATPKGRGGNALQKVIPVSPQLGKFLGASEASRTDAVKKVWDYIKLHNLQNPTNKKEIVCDEKLKALFPGKDRISFTDIAKCLSNHFVKSG 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1306 122 SUPERFAMILY SWIB/MDM2 domain 41 120 IPR036885 -
Prci10g1306 122 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 29 119 - -
Prci10g1306 122 SMART swib_2 43 122 IPR019835 -
Prci10g1306 122 Gene3D SWIB/MDM2 domain 37 122 IPR036885 -
Prci10g1306 122 ProSiteProfiles SWIB/MDM2 domain profile. 42 120 IPR003121 -
Prci10g1306 122 Pfam SWIB/MDM2 domain 47 118 IPR003121 -
Prci10g1306 122 CDD SWIB-MDM2_like 48 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1306 Prci-Chr10 8635894 8637710 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Prci10g1306 SWIB 2.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1306 - - qsa:O6P43_033465 145.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1306 10 8635894 8637710 Prci10g1306 10 8635894 8637710 ECH