Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1255 ATGGTGGACACTCTGAAGTATCTGATGGGCTCGCCAGGCCCTTCCGGGTTTGGCTCTGGTTCTACCGCCGAACAAGTCACCGAACCGGCCTCCTCCAACCTTTCCTCTGTCACCGCCATCATTACCGGCGCGACGTCGGGAATCGGAGCTGAAACTGCGAGGGTTCTGGCGAAGCTTGGAGTGAGGTTGATTTTGCCGGCTCGAACCCTGAAAGCTGCCGAAGACGCTAAAGCTCGAATCCTCTCCGAGTCTCCCAACTCGCACATCATTGTGATGCCTCTCGATCTTAGTTCTCTCCGCTCTGTTCGGGCCTTCGTTTCTCACTTCCATTCCCTCCGTTTACCTCTCCACCTTCTCATAAACAACGCTGGAAAGTTCGCGCATCATCACGCAATCTCCGAAGATGGATTTGAGATTACCTTTGCAACGAATTATCTAGGTCATTTTCTGTTGACGGACTTGCTGTTGAAGACGATGGTGGAAACGGCGGAGAAGACGGGGATCCAAGGAAGGATCGTCAACGTGTCTTCCAACGTACATGGCTGGTTTTCCGGCGACATTATCCGATATCTAGCTCTTATTACCCGCGACCACAGCCATTACAACCCCACACGTGCTTATGCTCTGTCTAAGCTCGCCAACATCTTACACACCAAGCATCTTGCTCTCAAGCTCCAGCAAATGGGAGCTAACGTGACTGTGAATTGCGTTCATCCGGGGATAGTCAGGACCAGGCTCACCAGGGAACGTGAAGGCTTACTTACAGATATAGCGTTCTTTTTAACTTCGAAATTCCTCAAAACCATCCCCCAGGCTGCTGCGACGACATGTTATGTGGCGACGCATCCGAGGCTGTTAAATGTGTCCGGCAAGTACTTTGCTGACTGCAACGAAGCTTCCATGTCAAAACCAGGATCCAGTTCAACGGAAGCTGCAAGGTTGTGGGAAGCTTCCGAATCTATGATCTCCGTCGGCCCCAAATCTCTTCTCGACCTCCTCGACGACAGTGAATGA 1014 0.5178 MVDTLKYLMGSPGPSGFGSGSTAEQVTEPASSNLSSVTAIITGATSGIGAETARVLAKLGVRLILPARTLKAAEDAKARILSESPNSHIIVMPLDLSSLRSVRAFVSHFHSLRLPLHLLINNAGKFAHHHAISEDGFEITFATNYLGHFLLTDLLLKTMVETAEKTGIQGRIVNVSSNVHGWFSGDIIRYLALITRDHSHYNPTRAYALSKLANILHTKHLALKLQQMGANVTVNCVHPGIVRTRLTREREGLLTDIAFFLTSKFLKTIPQAAATTCYVATHPRLLNVSGKYFADCNEASMSKPGSSSTEAARLWEASESMISVGPKSLLDLLDDSE 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1255 337 Pfam short chain dehydrogenase 38 250 IPR002347 -
Prci10g1255 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 33 296 IPR036291 -
Prci10g1255 337 CDD retinol-DH_like_SDR_c_like 38 315 - -
Prci10g1255 337 PANTHER RETINOL DEHYDROGENASE 14 322 - -
Prci10g1255 337 PRINTS Glucose/ribitol dehydrogenase family signature 164 180 IPR002347 -
Prci10g1255 337 PRINTS Glucose/ribitol dehydrogenase family signature 230 247 IPR002347 -
Prci10g1255 337 PRINTS Glucose/ribitol dehydrogenase family signature 114 125 IPR002347 -
Prci10g1255 337 PRINTS Glucose/ribitol dehydrogenase family signature 207 226 IPR002347 -
Prci10g1255 337 PRINTS Glucose/ribitol dehydrogenase family signature 38 55 IPR002347 -
Prci10g1255 337 Gene3D - 23 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1255 Prci-Chr10 8267778 8270193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1255 24 293 Acyl Lipid Metabolism Gene Families AT1G24360 27.208 4.20e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1255 - - gmx:102670316 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1255 10 8267778 8270193 Prci10g1255 10 8267778 8270193 ECH