Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1247 ATGGCGATCGCTTCTCCCTCGACTCCGAGCTTCTCACCTTCTTTCTGCTCCACTCGGACCCAATTCACTGGCCTCTCGCGCTTTCCCTTGGTCACCTTGCCTCAGTCTCGTGCAAACCAAACTCGCTCTTTGACTCGTCGGCTTGTCGTATCGTCTCGGCTCAATTCGTCTAAATTCTCCGATGCTGATGGCTTTGTCTCGCCGGGCAATGGAGATTTCCCCTATGAACTCCAACACGATTTTTCACCTCAGCGTCAGAGGAGGGGATCGCCGGTATACGTCACGCTCCCGTTAGATGCCGTGGGCTCGGAGGGGCGAGTGCTGAGGCCGAAAGCTATGACGTTCTCGTTCAGGGCGCTCGCAATGGCTGGAGTAGAAGGCGTGGTCTTAGAGATTTGGTGGGGCTTAGTTGAGAGGAATGAGCCGATGGTTTATAATTGGCGAGGCTATTGGCAACTCGTCAAGCTGGCCGGGACGTGCGGCCTGAAGGTTCGAGTTGTCCTTGCGTTTCACCAGTGCGGCACGGGCCCTACTGATCCTAATTGGATACCTCTTCCTCTATGGGTACTTGATGAGATAAAAAAAGATCCAGAGTTAGTGTATTCAGATAGGTTTGGGACAATAAGTACTGAATACATTTCACTTGGATGTGATACACTTCCTGTGCTCTGTGGACGATCTCCAATTCAGGCATATGCTGATTTTATGAGGAACTTCAGGGACACCTTCAGGCCTTACTTTGGCAATATCATAACAGGAATACAGATTGGTATGGGTCCTGGTGGTGAATTAAGATATCCTTTATGCCCTTCCCAGTTAATCCATCCTAGGCGCAGTGAATTTGGAGAATTTCAGTGCTATGATAAGTATATGATTGCATCACTAAATGCTTGTGCGAGAGATATTGGAATGCATGCATGGGGACAAGGTCCTCCTCATGGCACCGGAAGTTTGAGGCACAATTTGTTTTCTACTAGTGATTATGGCCCTTGGAACTCGCCACAGGGTAAGTTTTTTCTTGAGTGGTACTCGGGGATGCTGCTACTGCATGGAGAAAGAATTTGTAGGGAAGCTGAAACTATATTTAGGGGTACAGAAGTCAACATATCAGCAAAAGTGGCTGCTATTCACTGGCACTATCTGACTGATTCCCATCCATCAGAGTTAACCGCAGGATACTACAACACTTCTGAGAGGGACGGATACTTACCTGTTGCTCGTATGTTTAGTAAGTATGGATTTGGCATGTGCTGCTCATGTTTTGAAATGCAAGATGCAGTAGAAAATAAGATTAACCCAGTTGGCAGCCCTGAAGGTTTTCTCAGACAGCTGCTGTTGGCTGCCAGGCTCTGTGACATACAACTGGAAGGTCAAAATTTTTCATCCAATTTCAATGACATAGCATTCGAGCAGGTGTTGAAGATGTCAAAGTTTTACGCAGAAGGGGTTGAAAAGCGTCCCTTCTCTTTCAACTTTGTGAGAATGGGAGGGAAAATGTTTGAATCCCGTTTTTGGGATCGATTTACTCGTTTTGTGAGGCAAATGTCAGATGGGAATAGCTTTCGAGCCAGATTAAATTCTGTTGGTGACGTGCGTCTTAAGTCCTTTTCTGGGGTTGCGGAAGTTGGACTGTTGTACCAGCACTGTTAA 1650 0.4709 MAIASPSTPSFSPSFCSTRTQFTGLSRFPLVTLPQSRANQTRSLTRRLVVSSRLNSSKFSDADGFVSPGNGDFPYELQHDFSPQRQRRGSPVYVTLPLDAVGSEGRVLRPKAMTFSFRALAMAGVEGVVLEIWWGLVERNEPMVYNWRGYWQLVKLAGTCGLKVRVVLAFHQCGTGPTDPNWIPLPLWVLDEIKKDPELVYSDRFGTISTEYISLGCDTLPVLCGRSPIQAYADFMRNFRDTFRPYFGNIITGIQIGMGPGGELRYPLCPSQLIHPRRSEFGEFQCYDKYMIASLNACARDIGMHAWGQGPPHGTGSLRHNLFSTSDYGPWNSPQGKFFLEWYSGMLLLHGERICREAETIFRGTEVNISAKVAAIHWHYLTDSHPSELTAGYYNTSERDGYLPVARMFSKYGFGMCCSCFEMQDAVENKINPVGSPEGFLRQLLLAARLCDIQLEGQNFSSNFNDIAFEQVLKMSKFYAEGVEKRPFSFNFVRMGGKMFESRFWDRFTRFVRQMSDGNSFRARLNSVGDVRLKSFSGVAEVGLLYQHC 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1247 549 SUPERFAMILY (Trans)glycosidases 89 530 IPR017853 -
Prci10g1247 549 Pfam Glycosyl hydrolase family 14 93 511 IPR001554 GO:0000272|GO:0016161
Prci10g1247 549 Gene3D Glycosidases 81 536 - -
Prci10g1247 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 124 138 IPR001554 GO:0000272|GO:0016161
Prci10g1247 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 331 350 IPR001554 GO:0000272|GO:0016161
Prci10g1247 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 167 188 IPR001554 GO:0000272|GO:0016161
Prci10g1247 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 367 383 IPR001554 GO:0000272|GO:0016161
Prci10g1247 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 145 163 IPR001554 GO:0000272|GO:0016161
Prci10g1247 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 384 395 IPR001554 GO:0000272|GO:0016161
Prci10g1247 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 259 281 IPR001554 GO:0000272|GO:0016161
Prci10g1247 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 402 425 IPR001554 GO:0000272|GO:0016161
Prci10g1247 549 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 41 519 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1247 Prci-Chr10 8197914 8201548 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1247 45 545 Glycoside Hydrolase AT4G17090 44.101 1.69e-144 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1247 K01177 - gmx:100805981 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1247 10 8197914 8201548 Prci10g1247 10 8197914 8201548 ECH