Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1239 ATGGGGAAAGCGAAACGATGGACTGTGACCTATACGAAGCACATCAAGCAAAAACGCAAAGGATACCAAGATGGTTTTCTAGAAGTCCAGGATTCGACTAACAAGGTTATGCTTTATGATGAGTGCGACAAACTCTTGGAGTGTAGACTATTGAAGAATGATGAAACTGTTAACCCTGGTGAAACTCTGACATTCAATTGCTACCTTGTTGACATCGGTGATCAGGAGGGAGATAGTAAACCTATTTCTGATTCAAATGTTGATAGAGCACATAAGAATTTTGCACGGCGTCCTAATAGGTTGAGTGGATCAAACTTTAGGACTCCATCAGGCGACAGCAAAACTAATGTAAAGGAGAGCAAAGAACGTCATGCTCTCAGCCCATCACAAAAGATTATTAAAGAGTTTAAGAAAAGAGAGCTTCTTAAGTATAAGTCACCGAAGATCAGTCCGGAAATAACGAAACCCAGCACACCAGAGTGGCAGGTTCTGTATACTTCACAAGTGACTCAAAAGGCAAAGAAGTACCATGATGGTTTTTTGAAACTTGTGATTTGTGGATCCAGTACTAGACAGGTAATGCTGTTTGATGGAAGCAGGAAACTTTTGGACAGCAAATTCCTTAAGAAAGATGACGTAATTGGACCTGGCGAGTCACTTGCATTTGATGCATATTTGGTTGATGTTTGTGAAGATCAAGGAAATCATGAACCAGATTCCAATGTTCGTGGTAAAAAATGCACTGATGCTGAGGAAATCAGGAAGATGCACTGGCAGCAATCTTGTCATGACACCCATGTAACTGGTAGACAAAGTGAGTGGCAGGTGATATATTCAACGCGGTCCACTAAAAAATCCAAGAGTTACCACGATGGTTTTTTACAACTTGAAATTTTTGGATCTCGAGGGAGACAGGTCGTTCTTTGTGATTTGAATAAAACACCTATAGAGCGCAGGTTCTTAATGAAAGATGAAGTTATAAGACCTGGTGAATCAATATACTTCGATGGCCATTTTGTTGATGTAGGAGAGCCCAAAGAAAGCCATCAATCTCCGATGAATGCTGATGAGAAAGGAACTGGTGATAATTTTGTTCAGAAAAACATAAGATATGAACACCACGGCTGTCTAAAGGCCAACCCGATTGTCGTCAAAGCCCATCAAATATTGTCTCTTTTGCAAAACCGTGTGGCTCCAGAGAGCAACGTTAAAGGTGTTGGGCCAACAATAGACTCAGCGCCCAGTCACGGTTCATATGAAAATCTTCAAGATATGGAATCCATTGAGACCATGAAGTCTTCCAATGTCTTGCCTTCTAAAGATTCTTCAGGAGCAAGTGGTAGCGCCAGCTTGCAATCACCCAATAATATCGGAAGTCCCCAGCAGCCCGATCCCTGCAAGGAAGCTCAGACAAATAAGAGTGAGGCAGTTTCTGATTTTTCCAAGTCAAGTTCGGGTGTGCACTCTTCTTGTTCTGTTACCAGCGAAGGTAAGAGAAATGAGGAGTTCTCGCGTTCAAAGGATATGGATGATTGCCCAAGCTTTGGCCTTGGGTTTTGA 1560 0.4199 MGKAKRWTVTYTKHIKQKRKGYQDGFLEVQDSTNKVMLYDECDKLLECRLLKNDETVNPGETLTFNCYLVDIGDQEGDSKPISDSNVDRAHKNFARRPNRLSGSNFRTPSGDSKTNVKESKERHALSPSQKIIKEFKKRELLKYKSPKISPEITKPSTPEWQVLYTSQVTQKAKKYHDGFLKLVICGSSTRQVMLFDGSRKLLDSKFLKKDDVIGPGESLAFDAYLVDVCEDQGNHEPDSNVRGKKCTDAEEIRKMHWQQSCHDTHVTGRQSEWQVIYSTRSTKKSKSYHDGFLQLEIFGSRGRQVVLCDLNKTPIERRFLMKDEVIRPGESIYFDGHFVDVGEPKESHQSPMNADEKGTGDNFVQKNIRYEHHGCLKANPIVVKAHQILSLLQNRVAPESNVKGVGPTIDSAPSHGSYENLQDMESIETMKSSNVLPSKDSSGASGSASLQSPNNIGSPQQPDPCKEAQTNKSEAVSDFSKSSSGVHSSCSVTSEGKRNEEFSRSKDMDDCPSFGLGF 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1239 519 PANTHER ZINC FINGER GRF-TYPE CONTAINING 1 268 477 - -
Prci10g1239 519 MobiDBLite consensus disorder prediction 432 519 - -
Prci10g1239 519 MobiDBLite consensus disorder prediction 98 113 - -
Prci10g1239 519 Pfam Protein of unknown function (DUF2439) 5 78 IPR018838 -
Prci10g1239 519 Pfam Protein of unknown function (DUF2439) 273 350 IPR018838 -
Prci10g1239 519 Pfam Protein of unknown function (DUF2439) 160 237 IPR018838 -
Prci10g1239 519 MobiDBLite consensus disorder prediction 432 497 - -
Prci10g1239 519 MobiDBLite consensus disorder prediction 97 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1239 Prci-Chr10 8157583 8164113 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1239 - - gmx:102665532 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1239 10 8157583 8164113 Prci10g1239 10 8157583 8164113 ECH