Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1216 ATGAGCTGTTTTTGCTTGAAGAAGATTAAAAAAAGGGCAGAGCACGAACAGTACATGGTTCTTTCTTCACAGACATGGTTCAGTGTGAATGAAGTGGAGGCCTTGGTTGACTTGTTTAAGAAACTAAGCAGTTCAATTGTCGATGATGGCCTTATTCACAAGGAGGAGTTCCGACTCGCACTTTTCCAAAACAGCAGGAAAGAGAATCTATTTGCAGACAGGGTGTTTGATCTGTTTGATATTAATCGTAATGGAGCAATTGACTTTGAAGAATTTGTGCGGTCACTGAGCATCTTTCATCCAAATGCTCCAACAGAGTTGAAGATTGCATTTGCATTTAAGTTGTTTGATCTTCGGAAGACTGGATACATTGAGCGTGATGAGTTGAAGGAGATGGTCCTGGCTATTCTGGCTGAATCAGATCTAACAGTTTCAGATGATATCGCAGAAGCAATTGTGGATAAGACCTTAAAGGAAGCAGACTCGAAAGGAGATGGAAAGATCGATGAAGAGGAGTGGAGAGAACTTGTAGCAAAGTATCCATCTCTTCTGAAGATGATGACTGTTCAATGTCTAAGGGATGTAACCATGTCCTTCACCAACTTTATTCTTAACACCCAGCTGGAAGAAGACGACTGCTAA 642 0.4112 MSCFCLKKIKKRAEHEQYMVLSSQTWFSVNEVEALVDLFKKLSSSIVDDGLIHKEEFRLALFQNSRKENLFADRVFDLFDINRNGAIDFEEFVRSLSIFHPNAPTELKIAFAFKLFDLRKTGYIERDELKEMVLAILAESDLTVSDDIAEAIVDKTLKEADSKGDGKIDEEEWRELVAKYPSLLKMMTVQCLRDVTMSFTNFILNTQLEEDDC 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1216 213 PANTHER CALCINEURIN B 3 209 IPR045198 GO:0005509|GO:0019722|GO:0019900
Prci10g1216 213 ProSiteProfiles EF-hand calcium-binding domain profile. 148 183 IPR002048 GO:0005509
Prci10g1216 213 ProSiteProfiles EF-hand calcium-binding domain profile. 104 139 IPR002048 GO:0005509
Prci10g1216 213 CDD EFh 108 178 IPR002048 GO:0005509
Prci10g1216 213 PRINTS Recoverin family signature 168 188 - -
Prci10g1216 213 PRINTS Recoverin family signature 122 140 - -
Prci10g1216 213 PRINTS Recoverin family signature 75 96 - -
Prci10g1216 213 Gene3D - 19 211 - -
Prci10g1216 213 Pfam EF hand 73 94 IPR002048 GO:0005509
Prci10g1216 213 ProSitePatterns EF-hand calcium-binding domain. 80 92 IPR018247 -
Prci10g1216 213 Pfam EF-hand domain pair 108 176 IPR002048 GO:0005509
Prci10g1216 213 FunFam calcineurin B-like protein 3 17 210 - -
Prci10g1216 213 SUPERFAMILY EF-hand 21 191 IPR011992 -
Prci10g1216 213 ProSiteProfiles EF-hand calcium-binding domain profile. 67 102 IPR002048 GO:0005509
Prci10g1216 213 SMART efh_1 108 136 IPR002048 GO:0005509
Prci10g1216 213 SMART efh_1 152 180 IPR002048 GO:0005509
Prci10g1216 213 SMART efh_1 71 99 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1216 Prci-Chr10 8045945 8050373 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1216 1 210 EF-hand Containing Proteins AT5G55990 55.238 1.89e-84 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1216 K06268 - qsa:O6P43_034353 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1216 10 8045945 8050373 Prci10g1216 10 8045945 8050373 ECH