Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1199 ATGACTTTGACCACGTGCACTCCTCGCTTCTCTCGGCTTCCTCCTCCTCCTCGTTCTCCTTCAAGTCTTCCGCAACTATGCGAAACATGCGCACTTCACTGTGGCAACACTTCTTTCCTGCCTCACCTCCTGGGGTGCTCCTCAGTTTCGTTCAATATATCGAAATTCATCAAGGCTAAAGCTTCTGTGAGTGAGAGCGATCATGAGATTTCAGCAAATAACGTTTCGGAGTTATTGGACCAGGAGTTACTGGTCAGCGTTGCCGCTGCCAAAGACGCCGACGAGGCATTGCAGATAATCGCTGAAAAGTCTAGAAGAGATGAAGGTGTTGTTTGCACGACTGATTGTTGCTCCATTATAGTGGCTGCACTTAATCGGAACAATGCGGAGCTGGCTTTGTCGGTATTCTTCGCCATGAGCTCTAGTTTTAATCAAGTTGCTGAGAAGGGCCCTTTGGTTGAGAGATGGAAGTGGTCCAGGCCAAATGCGCATGCTTACACGTTGTTAATTCAGGGTCTTGCATCATCATTAAGGGTTTCAGATGCTCTTCGGGTCATTAAATATATTTGTGAAGTGGCAGTATCTCCTGGTGAGGAGATATTGTTGCAGGTGCCTTTTGGAAAGATAGTGAGATGTCCTAGTTGTAGGATAGCTGTTGCTGTTGCGCAGCCACAGCAAGGTATTCAGTTGGTATCCTGTGCGAAGTGTCGCTACGAATATGAACTTGTTTCTGGTGACATAATCAGTATTCAATCTGAAGAAATCAGCATGGATATTACGCCATGGGAAAGGGGGCTAAAATTCCTTCAACTGAAGAAGCGAAGCATTCCTGCTGCAGTTCATTCCATTGTGGTGCAGACCCCTTCAGGTATGGCTCGCACACATAGATTTGCAACTGAAACAGTTGATGTGCCAGCGCAAGTAGGAGAAAGGGTAACTGTTGCTGTGGCAGCTCCATCAAATGTCTATAGAGAGGTAGGCCCCTTCAGATTTAGTCCCAGGGCCCCTGATTTCTATCCTGGTGAGGCTATGTGCTTGACGAACCACAAAGATGGCCGAGAATCACTTCTATTAAGAGCCCCAAGAAAAGAAGGAGATTCATCATTGCTTAAACCCTATTTCCTTTTTCCTCTTCTTGCTGTATTTGCAACCGGTGATGCAGCATCTGGACTTATTGACCCCAGCCTGCCCCAGTTTATATCAGTTGTTGCAGTTTCATCTCTTGCTGTTGGGGCAACATTGAATTCTTTTGTTTTTCCCCAGTTGAATCTGCTTCCGCAAGGATCAGTTGAAGCAATCGCTATCAAACAACAACTTTTATCTCAATATGATGTGCTTCAGTCTCGCATCAAAGACCTAAAAGAAGCTTCTGAAAAAGAGGTGTGGATGTTGGCTCGAATGTGCCAACTGGAAAACAAAATTTCTGTTGTTGGAGAACCCTCATATCGAGCTCGTAAAAGTAGAATCAAGAGGGTACGAGAGAGCTTGCAGAAGTCCCTCAGGGGACGGATTGAATTGATCGACAGCTATGCCAGAATCTCTTCAATGATTGAAATTGAGGTGGAGATGGACACTGATGTTCCTGCTGCTGAAACTGTGAGCAACGCGGATAATATCATGGAACAGATACAACAAATCATGGAGCTTGAAAATCTTGAAGAGAGATGGAAAATACAAGCCGAAGCCAATGATGAGGCTGAAAGACTTCTTAGTTCGCAGTCCTTACCTTATGAAGAAGTTTAG 1743 0.4521 MTLTTCTPRFSRLPPPPRSPSSLPQLCETCALHCGNTSFLPHLLGCSSVSFNISKFIKAKASVSESDHEISANNVSELLDQELLVSVAAAKDADEALQIIAEKSRRDEGVVCTTDCCSIIVAALNRNNAELALSVFFAMSSSFNQVAEKGPLVERWKWSRPNAHAYTLLIQGLASSLRVSDALRVIKYICEVAVSPGEEILLQVPFGKIVRCPSCRIAVAVAQPQQGIQLVSCAKCRYEYELVSGDIISIQSEEISMDITPWERGLKFLQLKKRSIPAAVHSIVVQTPSGMARTHRFATETVDVPAQVGERVTVAVAAPSNVYREVGPFRFSPRAPDFYPGEAMCLTNHKDGRESLLLRAPRKEGDSSLLKPYFLFPLLAVFATGDAASGLIDPSLPQFISVVAVSSLAVGATLNSFVFPQLNLLPQGSVEAIAIKQQLLSQYDVLQSRIKDLKEASEKEVWMLARMCQLENKISVVGEPSYRARKSRIKRVRESLQKSLRGRIELIDSYARISSMIEIEVEMDTDVPAAETVSNADNIMEQIQQIMELENLEERWKIQAEANDEAERLLSSQSLPYEEV 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1199 580 Coils Coil 436 456 - -
Prci10g1199 580 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 33 579 - -
Prci10g1199 580 Gene3D Tetratricopeptide repeat domain 52 198 IPR011990 GO:0005515
Prci10g1199 580 MobiDBLite consensus disorder prediction 1 20 - -
Prci10g1199 580 Coils Coil 549 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1199 Prci-Chr10 7980882 7988302 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1199 - - gmx:100781803 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1199 10 7980882 7988302 Prci10g1199 10 7980882 7988302 ECH