Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1185 ATGTTGAACTTGTTTTCTCTGAGGAACCTGTCTTGGGGTTCCCGTACTGCTGGCCAGGAAAAGGTCGAGGTAACTGCTGCGGAAGTAGAATCACTTCAATCAGAACTTGCTGATGCAGAAGAGAGGGAAGCTCACTTAAAAGCTCAATTGGATCATATTGATGAGATTCTTCGGTCAGCTCGTCTATCTGGCTACATGTACATCAGAACGAGATGGACGGCGCTGCCAGGAGATCCTCCACCTATAGATGATTCTGATGTAGATGATTGGGTTCCTCGTTTTGTTGTTCTCCAGGGAGAATGCATTTTCACGTATTTGTTGTGTTCAGATCTAAGTCCTCAAGACACCACTCCTCTATCTGATATTGTTGAAGTGGGGCTGCTACCAAGTTTTAAACGGGAGGATGATGAGAGACAACATGCCTTTTTTATCTTATCTCGTCTAGGATTTCGATACGAGTGTTCAAGTAGTTCCAAAATACAGGTGGACTCTTGGTTGTCGGCTTTACGAACTGACTGCAACTTGGACTCGCAAGTTTGCAGATCTGCTTCTAGAGCCGTGAGATCTTTTCTCTCTGCTTCCAGGGGCTCTCGCTTTTACTCCGAAGGGCGCAATGTAGCTGCTGCTGTTTCAATCACAAGGAAAGTGCCTCTTTTTGCCACAAATTTTGGGAAGTCTGAATCCGGAAGTGGACCCAGATCATGGCTTTCAGGGGTTCTCGCTCTTCCTGCTGCAGTTTACTTGCTCCAAGATCAAGAGGCACATGCTGCAGAGCTGGAGCGCACTTTCATTGCCATTAAGCCCGATGGAGTCCAAAGAGGACTGATTTCAGAGATTATATCTCGTTTTGAGCGGAAGGGGTACAAACTCGTGGGAATTAAAGTGGTGATTCCTTCAAAAGATTTTGCACAGAAGCATTATCATGACCTGAAGGAAAGACCCTTCTTCAATGGCCTATGTGAATTCCTAAGCTCTGGCCCTGTTGTTGCAATGGTCTGGGAAGGACAGGGAGTCATTTCCTATGGCCGAAAACTAATAGGAGCCACTGATCCACAGAAGTCTGAGCCTGGCACCATCAGAGGTGACCTGGCTGTCGTAGTTGGAAGAAATATCATCCACGGGAGTGATGGGCCGGAGACTGCTAGGGACGAAATTAAGTTGTGGTTTGAGCCAGAAGAGTTGGTAAATTACACGAGCAATGCAGAAAAGTGGATTTATGGTGTAAACTGA 1230 0.4634 MLNLFSLRNLSWGSRTAGQEKVEVTAAEVESLQSELADAEEREAHLKAQLDHIDEILRSARLSGYMYIRTRWTALPGDPPPIDDSDVDDWVPRFVVLQGECIFTYLLCSDLSPQDTTPLSDIVEVGLLPSFKREDDERQHAFFILSRLGFRYECSSSSKIQVDSWLSALRTDCNLDSQVCRSASRAVRSFLSASRGSRFYSEGRNVAAAVSITRKVPLFATNFGKSESGSGPRSWLSGVLALPAAVYLLQDQEAHAAELERTFIAIKPDGVQRGLISEIISRFERKGYKLVGIKVVIPSKDFAQKHYHDLKERPFFNGLCEFLSSGPVVAMVWEGQGVISYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETARDEIKLWFEPEELVNYTSNAEKWIYGVN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1185 409 SUPERFAMILY PH domain-like 53 171 - -
Prci10g1185 409 PRINTS Nucleoside diphosphate kinase signature 326 343 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Prci10g1185 409 PRINTS Nucleoside diphosphate kinase signature 262 284 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Prci10g1185 409 PRINTS Nucleoside diphosphate kinase signature 306 325 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Prci10g1185 409 PRINTS Nucleoside diphosphate kinase signature 347 363 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Prci10g1185 409 PRINTS Nucleoside diphosphate kinase signature 370 389 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Prci10g1185 409 FunFam Nucleoside diphosphate kinase 255 407 - -
Prci10g1185 409 Hamap Nucleoside diphosphate kinase [ndk]. 259 394 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Prci10g1185 409 SMART ndk_5 259 396 IPR034907 -
Prci10g1185 409 ProSitePatterns Nucleoside diphosphate kinases active site. 370 378 IPR023005 -
Prci10g1185 409 Pfam Nucleoside diphosphate kinase 260 393 IPR034907 -
Prci10g1185 409 Gene3D - 58 179 IPR011993 -
Prci10g1185 409 SUPERFAMILY Nucleoside diphosphate kinase, NDK 259 406 IPR036850 -
Prci10g1185 409 Coils Coil 22 56 - -
Prci10g1185 409 Gene3D - 250 407 IPR036850 -
Prci10g1185 409 PANTHER OS05G0595500 PROTEIN 1 390 - -
Prci10g1185 409 CDD PH 90 169 - -
Prci10g1185 409 CDD NDPk_I 260 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1185 Prci-Chr10 7933859 7942021 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1185 K00940 - pcin:129284597 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1185 10 7933859 7942021 Prci10g1185 10 7933859 7942021 ECH