Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1105 ATGAGGTGCCGATCCGTAGCGTGCATATGGTCTGGCACGCCCCCACCTCACAGAGTTACCGCCGTTGCCAGTTTTAGTCAGCCGCCATCCTTCTATACTGGTGGATCCGATGGCTCCATCATCTGGTGGGCCCTCTCCGATAGTTATTCCAGCCCGGAAGTTAAAGCAGTGGGTGTTTTGTGTGGTCATGCTGCACCGATCACTGATATTGGAACTTGCAGTCCTACAATAGCCGAAAAAGATGCAGGCCGTTCGAGTAATTTTAATGCATTAATAAGTGCATGTACCGATGGCTTCTTGTGTGTATGGAGTAGAAGCAGCGGTCATTGCCGGTGCAGGAGGAAATTGCCTCCTTGGGTGGGCAGTCCGTGCATGATTCGAACACTGCCTTCAAGAGCAAGATATGCATGTATTGGTTGTTCTTTCATGGACACGGTCAATTTGTCAGACCACTATTCTGTGATTGATAGAGAAACTCAGCCTAGGAAGCCTCCGAAATGCACTATCGTTATTGTTGACACATATTCGCTTACCATTACACAAACCGTCTTTCATGGAAATCTATCTATTGGCCCCATGAAATTTATGGCTGCAGTTTCAGTGTATAATGATAAAGAGAGGCATTCTATATTTGTGGCTGATTCAGTTGGTAAGCAACAAATGGTTTCCGTTTTGAAGGATCCTCATGATCAGGGGGAAAACTTTGCTAGTTTGCACAAAGATACATCTCAGCTGGAAAGTTCTGTTTGGGCTGAGGGATTGAGTGGTGCACGGCAAATTATTTCAATTGCAACCCATGGGAATGTTGCTGCTTTTGTGTTAAAAGACCACTGCATATTCAGGTTACTTTCTAGTGATACAAAATTGGGAGAGATTTCTTTTTCGGACAATCTTTTATGTTCTGATGAGGATTCTAGTCAAGCACATGTGATGGCGGCCATGTTTCTTGAAACTGTTGGTGCAAGGACTCTGCCAAATTGCCATGAAACGAGATGCTTGATTCCAGAAAGTTTTGTTGTCTGGAACAATATAGGTTATGCAGTTGTGTATAAAATATCATATGAGAATGACATTTTTCAATGTGAACCTCATTCTGAAATTCCTTCTACTTGCTATAATCCAGACATGAGAGTATCCTTTTTTTTCTTACAAGTTGATCATTGGCTGCTTCGTATTGAATCTGTCTGCCTTCACTTTGAGGACCCTTTACTATGGAGGCCTCACGTCACTATCTGGTCACCACATCATTTTGACAATAAGAACGGTAAATTTTACCAGCAATGTAGAATGGTCAGGGAAGGTGTATCGTTCACTGACCTGTTTAAGAACTCTACTCAGTTGAGAGGGTTAAATAGTGTAGGGACAGAATCAATTTCTAGTATGGAATGCTTAGGTAATTACAATATTAACGAGGGACAGATTGTTTCTTCTTCAATGATCATATCAGAGAACCTTGTTGCTCCTTATGCTGTTGTATATGGTTTCTTAAGTGGATTAATAGAGGTTGTAAGATTTGATCTGTTTCAGAGGATGAGTTTAGATGGTGCAAGTTCCAAAACTGAGGAAAAATCAGTTGCATGCCAACAGTACTTCTCTGGGCACTCAGGTGCTGTACTTTGTTTGGCAGCTCACCAAATGATGGGTAGCTCCAAAGGCCGGAGTTTTAATCAGGTTTTGGTGTCTGGAAGTGTGGACTGCACCGTTCGCTTGTGGGATCTTGACACTGGCTGTCTTATTATGGTTATGCATCATCATGTGGCACCAGTGCGCCAAATTATTCTTCCCCCATCTTTCACTGATCGTCCTTGGAGCAATTGCTTCCTTTCAATTGGAGATGACTCATGTGTTGCTCTTGTTTCTCTTGAAACTTTGCAGGTGGAGAGAATGTTTCCTGGTCACATGAACTATCCTACAAAAGTTGTATGGGATGGAGCTAGAGGTTACATTGCTTGTCTCTGCCAAACACATACTGGAACGTCTGATACTTCTGTTCTATTATACTTATGGGATGTAAAGACTGGTTGCCGCGAGCGAATTCTTCGTGGTACAGCTGCACATTCTATGTTTGATCATTTTTGTGATAGCATCAGCATGAATTCCACATCTGGCACATTGTTGAATGGAAATACATCAGTGTCTTCATTACTTCTCCCAACTGTTGAAGATGGAAGGTGGTTTAAATCCTCATCCAGCATTTCAGGGAGCTTGGTCACTTCATCTAGGTCATCACCAAGCATTTCAAATGTGGCTGAGCTGAATGCTTCCCAAACTCATGCAGACAAAGCAAATAAAGATAGAGCATATTCATCTTCTATGTCCATCCTCTGGAGTAAGAAGCACCCAATAAAATGCTCTAGCCCATTTCCTGGTATTGTGGCTTTGAGTTTTGATCTTACATCATTGATGTTCTCTTATCAGAAGCCTGAATTCATTGTCAGTGGAGGTCATGAACCAGTGACTATCGATTTAAAGCAGCAGGAAATTCGAAACCGAAATTCCAATCATGAAATTCTAGAAACACATGAGGTCCTAACTGATACTGGAGAGGGGCGTGATAAGCTATTTGAAGAATACTTACTTCGATTTAGCTTGTCATTTTTGCATTTGTGGGATGTAGACACTGAGCTTGATGATTTGCTGATGAGAGACATGAAACTGAGGAGACCAGAAAATTTTATAATAGCTGCAGGTCTGCAGGGGGATAGAGGGTCTTTAACATTGACATTTCCTGGTCTGAGTGCTGTTCTCGAGCTTTGGAAATCATCAGCTGAGTTTTGTGCAATGAGGTCATTGATGATGGTATCTCTTGCCCAACGTTTGATTAGCATGTCTCACTTTGATTCAGCGGCTGGCAGTTCTTTAGCAGCATTCTATACTCGGAATTTCACAGAAAAAATTCCAGATGTGAAGCCACCTTCATTGCAGCTTCTGGTGGCTTTTTGGCAAGCTGAGAGTGAACACATACGTATGGCAGCACGTTCTTTATTTCATTGCGCAGCCTCTCACGCCATCCCGGTACCTCTACGCAATTTAAACACTACTGAGCAAACCAATATTAAATCTGTAGCTAGAAGCAGAGGTAAAGAGCAGGGTAATACAGGATTAAAAAGTGATGAACAAGAAGTAACCTCCCAAACTGAGGAGTCCAACATACTTGCATGGTTAGAATCATTTGAAGTGCAAGATTGGATTTCTTGTGTTGGGGGAACAAGTCAAGATGCAATGACATCTCACATTATTGTTGCTGCTGCATTGGCAATCTGGTATCCTAGTCTTGTGAAGCCAAGCCTTGCCACATTAATTGTTCATCCGTTGATGAAGTTGGCTATGGCCATGAATGAGAAGTATAGCTCCACTGCTGCCGAGCTTCTTGCGGAGGGCATGGAGAATACATGGAAAGATTGCATTGGGTCTGAGATACCTCGTCTGATTGGGGATATCTTTTTCCAAATAGAATTGAACGGGTCATCCACAAGTTTAGTTGCAGAAATTCCAGCTGTATCAGTTTCTATTCAACAGTCTTTGGTTGAGATTCTTCTTCCAAGTTTAGCCATGGCTGATATACCTGGTTTTTTGACTGTGATTGAAAGTCAAATTTGGTCTACTGCATCTGATTCACCTGTCCACTTAGTATCCTTGATGACTCTCATCAGGGTTATGCGCGGTTCTCCAAGGAACTTGGCTCAATATCTTGACAAGTGGGACAGATCTGCAGGTTGTCAGCTTCATTTTACAAACTATAGATCCTAG 3750 0.4227 MRCRSVACIWSGTPPPHRVTAVASFSQPPSFYTGGSDGSIIWWALSDSYSSPEVKAVGVLCGHAAPITDIGTCSPTIAEKDAGRSSNFNALISACTDGFLCVWSRSSGHCRCRRKLPPWVGSPCMIRTLPSRARYACIGCSFMDTVNLSDHYSVIDRETQPRKPPKCTIVIVDTYSLTITQTVFHGNLSIGPMKFMAAVSVYNDKERHSIFVADSVGKQQMVSVLKDPHDQGENFASLHKDTSQLESSVWAEGLSGARQIISIATHGNVAAFVLKDHCIFRLLSSDTKLGEISFSDNLLCSDEDSSQAHVMAAMFLETVGARTLPNCHETRCLIPESFVVWNNIGYAVVYKISYENDIFQCEPHSEIPSTCYNPDMRVSFFFLQVDHWLLRIESVCLHFEDPLLWRPHVTIWSPHHFDNKNGKFYQQCRMVREGVSFTDLFKNSTQLRGLNSVGTESISSMECLGNYNINEGQIVSSSMIISENLVAPYAVVYGFLSGLIEVVRFDLFQRMSLDGASSKTEEKSVACQQYFSGHSGAVLCLAAHQMMGSSKGRSFNQVLVSGSVDCTVRLWDLDTGCLIMVMHHHVAPVRQIILPPSFTDRPWSNCFLSIGDDSCVALVSLETLQVERMFPGHMNYPTKVVWDGARGYIACLCQTHTGTSDTSVLLYLWDVKTGCRERILRGTAAHSMFDHFCDSISMNSTSGTLLNGNTSVSSLLLPTVEDGRWFKSSSSISGSLVTSSRSSPSISNVAELNASQTHADKANKDRAYSSSMSILWSKKHPIKCSSPFPGIVALSFDLTSLMFSYQKPEFIVSGGHEPVTIDLKQQEIRNRNSNHEILETHEVLTDTGEGRDKLFEEYLLRFSLSFLHLWDVDTELDDLLMRDMKLRRPENFIIAAGLQGDRGSLTLTFPGLSAVLELWKSSAEFCAMRSLMMVSLAQRLISMSHFDSAAGSSLAAFYTRNFTEKIPDVKPPSLQLLVAFWQAESEHIRMAARSLFHCAASHAIPVPLRNLNTTEQTNIKSVARSRGKEQGNTGLKSDEQEVTSQTEESNILAWLESFEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKPSLATLIVHPLMKLAMAMNEKYSSTAAELLAEGMENTWKDCIGSEIPRLIGDIFFQIELNGSSTSLVAEIPAVSVSIQQSLVEILLPSLAMADIPGFLTVIESQIWSTASDSPVHLVSLMTLIRVMRGSPRNLAQYLDKWDRSAGCQLHFTNYRS 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1105 1249 Gene3D - 1 230 IPR015943 GO:0005515
Prci10g1105 1249 ProSiteProfiles Trp-Asp (WD) repeats profile. 531 581 IPR001680 GO:0005515
Prci10g1105 1249 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 532 583 - -
Prci10g1105 1249 MobiDBLite consensus disorder prediction 1023 1044 - -
Prci10g1105 1249 Pfam WD domain, G-beta repeat 527 572 IPR001680 GO:0005515
Prci10g1105 1249 SUPERFAMILY WD40 repeat-like 16 682 IPR036322 GO:0005515
Prci10g1105 1249 Gene3D - 470 793 IPR015943 GO:0005515
Prci10g1105 1249 PANTHER RABCONNECTIN-3B, ISOFORM A 4 1233 - -
Prci10g1105 1249 SMART WD40_4 524 572 IPR001680 GO:0005515
Prci10g1105 1249 SMART WD40_4 575 620 IPR001680 GO:0005515
Prci10g1105 1249 SMART WD40_4 5 44 IPR001680 GO:0005515
Prci10g1105 1249 SMART WD40_4 623 670 IPR001680 GO:0005515
Prci10g1105 1249 SMART WD40_4 53 104 IPR001680 GO:0005515
Prci10g1105 1249 ProSitePatterns Trp-Asp (WD) repeats signature. 559 573 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1105 Prci-Chr10 7361906 7369076 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1105 K24738 - gmx:100816646 1642.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1105 10 7361906 7369076 Prci10g1105 10 7361906 7369076 ECH