Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1095 ATGTCTTCAGTTCATAGATTCACAATGGCGGCCATTTCCAGTTCCTTGTCCCTTAAGCACGGCCTCTCACTTTGGTGTCCTCAAGCCGGCTCTCTCAATCGACCTAATCATTCTTCTTCAATCCCGTTCAGAACATTCTCGAGATGCTACGCCGCTTTCGCTAATGAGAATCGGGAGTGTGTGATCGTTGGGGGTGGAAATGCCGCGGGATACGCTGCTCGAACTTTCGTTGAGCACGGCATGGCGGATGGACGTCTATGTATTGTGACTAAAGAGGCATATGCGCCTTACGAGCGTCCGGCTTTAACAAAAGGTTATCTATTCCCGCCAGATAAGAACCCTGCGCGTCTTCCTGGATTTCACACTTGTGTTGGATCCGGTGGGGAGAGGCAGACTCCAGATTGGTATGAAGAGAAAGGGATAGAGATGTTATATCAAGATCCAGTAAAGAGCATTGATATTGAACAGCAAACGTTGACAACAAATTCAGGAAAACTGCTCAAGTATGGCTCACTTATTATTGCCACAGGATCTACAGCCTCCAGGTTCCCGGAGAAAATTGGGGGAAATCTACCTGGTGTTCACTACATCCGTGATGTTGCAGATGCTGATTCACTAGTCTCATCATTGGGGAAAGCACGCAAGGTAGTTGTAGTTGGAGGTGGTTATATAGGAATGGAGGTTGCTGCTGCTGCTACTGGTTGGCAGCTTGATACAACAATTATATTTCCAGAGGATCATTTATTGCAAAGACTATTCACTCCTTCTCTCGCTCGAAGATATGAAGAACTCTACCAAAAGAATGGTGTCAAAATCTTAAAGGGTGCCTCTATTAAAAACTTGGAAGCTGGTTCCAATGGGCATGTAACTGCTGTGAAACTTGGAGATGGATCTACTATAGAAGCAGATACAGTAATTATAGGCATTGGAGCGAAACCTGCAGTTGGTCCCTTTGAGAGGGTGGGTCTGAATAAAGATGTTGGTGGTATACAGGTGGATGGTCAATTTCGGACAAGTATTCCTGGAATCTTTGCCATTGGTGACGTAGCAGCTTTCCCATTGAAGATATACAATCGTATCTCCCGAGTTGAACATGTGGATCATGCTCGTCGATCTGCACATCACTGTGTGAAAGCATTACTCAGTGCACAAACTCACACGTATGATTATCTTCCATACTTCTACTCAAGGGTGTTTGAATATGAAGGGAGCCCCAGAAAAGTTTGGTGGCAATTTTTCGGAGACAATGTTGGGGAAACTGTTGAAGTCGGGCATTTTGATCCTAAAATTGCTACTTTCTGGATTGAATCTGGAAAGCTAAAAGGAGTCCTCCTTGAAAGTGGGAGCCCTGAGGAATTTCAGCTGCTTCCCAAACTTGCCAGAAGTCAGCCTGTGGTTGATAAAGCCGAACTTGAAAAGGCATCTTCAGTGGAAGAGGCCCTAGCCCTTGTTGGGGCATCCTTGGGTTGA 1470 0.4558 MSSVHRFTMAAISSSLSLKHGLSLWCPQAGSLNRPNHSSSIPFRTFSRCYAAFANENRECVIVGGGNAAGYAARTFVEHGMADGRLCIVTKEAYAPYERPALTKGYLFPPDKNPARLPGFHTCVGSGGERQTPDWYEEKGIEMLYQDPVKSIDIEQQTLTTNSGKLLKYGSLIIATGSTASRFPEKIGGNLPGVHYIRDVADADSLVSSLGKARKVVVVGGGYIGMEVAAAATGWQLDTTIIFPEDHLLQRLFTPSLARRYEELYQKNGVKILKGASIKNLEAGSNGHVTAVKLGDGSTIEADTVIIGIGAKPAVGPFERVGLNKDVGGIQVDGQFRTSIPGIFAIGDVAAFPLKIYNRISRVEHVDHARRSAHHCVKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETVEVGHFDPKIATFWIESGKLKGVLLESGSPEEFQLLPKLARSQPVVDKAELEKASSVEEALALVGASLG 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1095 489 SUPERFAMILY FAD/NAD(P)-binding domain 55 380 IPR036188 -
Prci10g1095 489 PRINTS Pyridine nucleotide disulphide reductase class-I signature 215 240 - -
Prci10g1095 489 PRINTS Pyridine nucleotide disulphide reductase class-I signature 303 317 - -
Prci10g1095 489 PRINTS Pyridine nucleotide disulphide reductase class-I signature 343 350 - -
Prci10g1095 489 PRINTS Pyridine nucleotide disulphide reductase class-I signature 59 81 - -
Prci10g1095 489 PANTHER APOPTOSIS-INDUCING FACTOR 1 58 480 - -
Prci10g1095 489 Gene3D - 393 479 IPR016156 GO:0016491|GO:0050660
Prci10g1095 489 PRINTS FAD-dependent pyridine nucleotide reductase signature 302 318 - -
Prci10g1095 489 PRINTS FAD-dependent pyridine nucleotide reductase signature 215 233 - -
Prci10g1095 489 PRINTS FAD-dependent pyridine nucleotide reductase signature 169 187 - -
Prci10g1095 489 PRINTS FAD-dependent pyridine nucleotide reductase signature 61 80 - -
Prci10g1095 489 PRINTS FAD-dependent pyridine nucleotide reductase signature 328 350 - -
Prci10g1095 489 Pfam Pyridine nucleotide-disulphide oxidoreductase 60 373 IPR023753 GO:0016491
Prci10g1095 489 Gene3D - 183 310 IPR036188 -
Prci10g1095 489 Gene3D - 61 375 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1095 Prci-Chr10 7286201 7291381 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1095 166 392 Acyl Lipid Metabolism Gene Families AT1G48030 25.306 3.57e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1095 K08232 - pvy:116107428 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1095 10 7286201 7291381 Prci10g1095 10 7286201 7291381 ECH