Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1062 ATGTCTTCTCCCAGTAAACGTCGAGAGATGGACTTGATGAAGCTGATGATGAGCGATTACAAGGTGGATATGATCAATGATGGCATGCAGGAGTTTTATGTGCATTTTCACGGGCCTAAAGACAGTCCTTATCATGAAGGTGTATGGAAGATCAGAGTAGAGCTTCCTGATGCTTATCCCTATAAATCTCCATCCATTGGTTTTGTCAACAAAATATACCACCCTAATGTTGATGAAATGTCTGGCTCAGTTTGCTTGGATGTTATTAACCAGACCTGGAGTCCCATGTTTGACCTTGTTAATGTATTTGAAGTATTTCTTCCCCAACTTCTTCTGTACCCCAACGCATCAGATCCATTGAATGGTGAAGCTGCTGCACTGATGATGCGTGATCGTGCTGCATATGATCAAAAAGTCAAAGAATATTGTGAAAAGTATGCCAAGCCAGAAGATGTTGGTGCTACCCAGGATGAAAAATCCAGTGATGATGAAGAGCTAAGTGAAGACGATTATGGCTCCAGTGATGAGGGAATTGCTGGGCAACCTGATCCTTAA 555 0.4216 MSSPSKRREMDLMKLMMSDYKVDMINDGMQEFYVHFHGPKDSPYHEGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNASDPLNGEAAALMMRDRAAYDQKVKEYCEKYAKPEDVGATQDEKSSDDEELSEDDYGSSDEGIAGQPDP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1062 184 MobiDBLite consensus disorder prediction 146 160 - -
Prci10g1062 184 Pfam Ubiquitin-conjugating enzyme 10 142 IPR000608 -
Prci10g1062 184 Gene3D Ubiquitin Conjugating Enzyme 1 161 IPR016135 -
Prci10g1062 184 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 148 IPR000608 -
Prci10g1062 184 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 29 136 - -
Prci10g1062 184 CDD UBCc 7 143 IPR000608 -
Prci10g1062 184 MobiDBLite consensus disorder prediction 146 184 - -
Prci10g1062 184 SUPERFAMILY UBC-like 4 148 IPR016135 -
Prci10g1062 184 SMART ubc_7 4 148 - -
Prci10g1062 184 FunFam Ubiquitin-conjugating enzyme 5, E2 1 159 - -
Prci10g1062 184 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 73 89 IPR023313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1062 Prci-Chr10 7127773 7130915 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1062 K10576 - vvi:100244806 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1062 10 7127773 7130915 Prci10g1062 10 7127773 7130915 ECH