Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1060 ATGGCGCGGTTGGTTCTGCCATCAAAGACTCTGGCTTTTTCGAGGAAGAGTATACTGGGCTTGATCTCCACTGCTCCTCTTCAGGCAACTAGCCGTGTTAACTTTGTTGAGAATACAACAAAGAATAGCATCATATTGAGGCGTTTCCTTACTTCACAGGTCATTTTCCGAAAGAGCTGCTGCCCATTTCACCCTTCATTTTCTTCTACAGTCAAGCAAGTGAACCGAAGGCTAGTTTGTTCAGTTGCCACAGAGGACTTGCCCAAGCAAGTTGAAGAACCTAATATGGAGACACCGAGAGAAATATTCTTGAAGGATTACGAGATGCCTGACTACTACTTTGACACAGTGGATCTGAGATTTTCCTTGGGTGAGGAGAGCACAATGGTTAGCTCAAAAATTACCGTGTTTCCTCGCATTGAAGGTTCTTCTCCCCCACTTCTTTTGGATGGACATGACTTAAAATTGATTTCAATTCAGCTAAATGGCAAAGCCTTGAAGGAGGAAGATTACCATTTGGGTGCACGAGATCTAACCATCCATTCACCTCCTAGTGGTAAATTTGTTCTAGAAATCATAAATGAGATCTACCCACAGAGGAACACATCCTTAGAGGGACTTTACAAGTCGTCTGGAAATTTCTGCACTCAATGTGAGGCTGAAGGATTTCGTAAAATTACATTTTATCAGGATCGACCTGATATAATGGCAAAATATACTTGTCACATTGAGGCAGATAAATCATTGTACCCGGTGTTGTTGTCTAATGGAAACCTGATTGAGCAAGGGGACTTGGAGAATGGGAAGCATTATGCTGTTTGGGAGGACCCCTTCAAAAAGCCTTGCTATTTGTTTGCTTTGGTTGCTGGGCAGTTACAGAGTAGAGATGACACATTTATCACACTCTCAGGACGCAAGGTATCTCTAAGGATCTGGACCCCTGCAGAGGATGTACCCAAGACTGCACATGCCATGTATTCTCTAAAGGCAGCTATGAAGTGGGATGAAGATGTTTTTGGTCTTGAATATGACCTGGATCTCTTCAATATTGTTGCTGTCCCTGATTTTAACATGGGAGCCATGGAAAACAAGAGTTTGAATATCTTCAACTCCAAGCTTGTTTTGGCATCTCCAGAAACTGCTACTGATGCAGATTATTCTGCAATATTGGGAGTTATTGGGCACGAGTATTTCCACAATTGGACCGGCAACAGAGTGACTTGTCGTGATTGGTTCCAGCTTAGCCTGAAGGAAGGTCTCACTGTTTTTCGTGATCAGGAATTTTCATCTGACATGGGAAGCCGTACTGTTAAACGAATCACTGACGTTTCAAAACTTCGAAATTATCAATTTCCACAGGATGCTGGGCCCATGGCTCATCCAGTGCGACCACACTCTTACATCAAGATGGACAACTTCTACACAGTGACGGTCTATGAGAAGGGGGCTGAAGTTGTCAGAATGTACAAAACCTTGTTGGGAAATCAAGGGTTTCGAAAAGGCATGGATTTATATTTTAAGAGACATGATGGGCAAGCAGTGACGTGTGAAGATTTTTTTGCTGCAATGCGAGATGCAAATCATGCAGATTTTGCAAATTTCTTACTCTGGTACTCACAAGCTGGAACCCCTATTGTCAAAGTGAATTCCTCTTATAATCCTGAAGCACATACTTTTTCTTTAAAAATTAGTCAAGAGATTCCACCAACTCCAGGACAAGCAGTTAAGGAACCTATGTTCATTCCTCTGGCAGTAGGTTTGCTTGATTCTACAGGCAAGGACATTCCTCTTTCAACTATATATCATGATGGAACTTTGCAGTCTCTTTCACGAGATGGTCAACCTGTCTACACTACAGTTCTTCAGCTCACCGAGAAAGAAGACGAATTTGTGTTCTCAGATATATTTGAGAGGCCTGTCCCATCTCTATTACGGGGATACAGTGCTCCAGTCCGTCTTGAATCAGATCTCACTGACAGTGACCTGTTTTTCCTACTGGCTAATGATTCAGATGAATTTAACCGTTGGGAGGCTGGGCAAATTCTGGCTCGTAAGCTGATGCTCAGCTTGGTGGATGATTTCCAACATAACAAACCATTAGTTCTGAATCAAAAATTTGCGGATGGTTTTAAGAGCATTCTATCTGACTCAAGCCTGGATAAAGAATTTGTTGCAAAGGCTATAACTTTGCCTGGTGAGGGAGAAGTAATGGACATGATGGAGGTTGCAGATCCTGATGCTGTTCATGCTGTTCGAACTTTTATCAGGAAACAGCTTGCAAGTGAACTGAGAGCAGAATTCCTCAGCACACTTAAAGATAATAGGAGCTATGAAGAGTATGTGTTCAATCATCCTAACATGGCCAGACGTGCTTTGAAAAATATTGCTCTTGCATATCTTGGCTGCCTAGAGGATCCAGAGATCACCAACCTTTTGCTGCATGAGTATAATGCTGCCACAAATATGACTGAGCAATTTGCAGCTTTGGCAGCCATAGCTCAAAACCCTGGTAAAACTCGTGATGACGTTCTTGCTGACTTCTATGGCAGGTGGCAGCGTGACTTCCTGGTGGTGAATAAGTGGTTTGCGCTTCAAGCAATGTCTGACATTCCTGGAAATGTTGAGAATGTGAAGCAACTGTTAAATCACGCAGCATTTGACGTGCGCAATCCAAACAAAGTTTACTCACTCATTGGAGGTTTCTGTGGATCTCCAGTGAACTTCCATGCAAAGGATGGATCAGGCTACAAGTTTTTGGGAGAAATTGTGCTTCAACTTGACAAGATCAACCCTCAAGTCGCCTCGCGACTGGTGTCTGCCTTCTCTAGATGGAAGCGTTATGACGAAAACAGACAAAAACTTGCCAAGGCCCAGCTGGAGCTAATCATGTCAGCTAATGGACTGTCAGAGAATGTGTATGAGATTGCGTCCAAAAGCTTAGCTGTTTAA 2949 0.4296 MARLVLPSKTLAFSRKSILGLISTAPLQATSRVNFVENTTKNSIILRRFLTSQVIFRKSCCPFHPSFSSTVKQVNRRLVCSVATEDLPKQVEEPNMETPREIFLKDYEMPDYYFDTVDLRFSLGEESTMVSSKITVFPRIEGSSPPLLLDGHDLKLISIQLNGKALKEEDYHLGARDLTIHSPPSGKFVLEIINEIYPQRNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTCHIEADKSLYPVLLSNGNLIEQGDLENGKHYAVWEDPFKKPCYLFALVAGQLQSRDDTFITLSGRKVSLRIWTPAEDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYSAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRITDVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGNQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANHADFANFLLWYSQAGTPIVKVNSSYNPEAHTFSLKISQEIPPTPGQAVKEPMFIPLAVGLLDSTGKDIPLSTIYHDGTLQSLSRDGQPVYTTVLQLTEKEDEFVFSDIFERPVPSLLRGYSAPVRLESDLTDSDLFFLLANDSDEFNRWEAGQILARKLMLSLVDDFQHNKPLVLNQKFADGFKSILSDSSLDKEFVAKAITLPGEGEVMDMMEVADPDAVHAVRTFIRKQLASELRAEFLSTLKDNRSYEEYVFNHPNMARRALKNIALAYLGCLEDPEITNLLLHEYNAATNMTEQFAALAAIAQNPGKTRDDVLADFYGRWQRDFLVVNKWFALQAMSDIPGNVENVKQLLNHAAFDVRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLQLDKINPQVASRLVSAFSRWKRYDENRQKLAKAQLELIMSANGLSENVYEIASKSLAV 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1060 982 Pfam Peptidase M1 N-terminal domain 119 284 IPR045357 -
Prci10g1060 982 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 99 290 IPR042097 -
Prci10g1060 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 274 289 IPR001930 GO:0006508
Prci10g1060 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 392 407 IPR001930 GO:0006508
Prci10g1060 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 411 423 IPR001930 GO:0006508
Prci10g1060 982 PRINTS Membrane alanyl dipeptidase (M1) family signature 356 366 IPR001930 GO:0006508
Prci10g1060 982 FunFam Aminopeptidase N 109 292 - -
Prci10g1060 982 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 302 548 - -
Prci10g1060 982 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 95 981 IPR012779 GO:0008270
Prci10g1060 982 Pfam Domain of unknown function (DUF3458) Ig-like fold 542 655 IPR035414 -
Prci10g1060 982 CDD M1_APN 106 539 - -
Prci10g1060 982 Gene3D Neutral Protease Domain 2 378 541 IPR027268 -
Prci10g1060 982 Pfam Domain of unknown function (DUF3458_C) ARM repeats 659 981 IPR024601 -
Prci10g1060 982 Pfam Peptidase family M1 domain 326 534 IPR014782 GO:0008237|GO:0008270
Prci10g1060 982 Gene3D - 542 655 IPR038438 -
Prci10g1060 982 FunFam Putative aminopeptidase N 294 377 - -
Prci10g1060 982 NCBIfam aminopeptidase N 106 980 IPR012779 GO:0008270
Prci10g1060 982 FunFam Puromycin-sensitive aminopeptidase 657 981 - -
Prci10g1060 982 Gene3D tricorn interacting facor f3 domain 109 292 IPR042097 -
Prci10g1060 982 Gene3D - 657 981 IPR037144 -
Prci10g1060 982 FunFam Aminopeptidase N 542 656 - -
Prci10g1060 982 FunFam Aminopeptidase N 378 541 - -
Prci10g1060 982 Gene3D - 293 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1060 Prci-Chr10 7099824 7107898 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1060 K01256 - gmx:100775476 1705.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1060 10 7099824 7107898 Prci10g1060 10 7099824 7107898 ECH