Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1058 ATGCCGCCTTCTTCAACTTCTAATCCCTATGAATCTCCTCTTCCCAAATCAGACTCCAACATAGTTACCATTAATGTAGGTGGCCAATTCTTCCAAACCACGAAGCAGACTCTGAATTCTGCCGGCCCCAAGTCTTTCTTCGCCAAAATCGCCCAATTTCAATCCTCTACCCCATTCATTGACAGGGATCCTGAGTTGTTCGCTGTCCTCCTTTCCCTTCTCCGAACCGGTAATCTTCCTTCCAGAGCCAAGGCATACGATCTTCAAGATCTGATTTTCGAGTCCCAATTTTACGGCATCGAGCACACACTCAGGAATTCCCTATCCAGTCCTTCTCAGTTCGAGCCCTTCAACCTCCAGAAATCGATTGTTTTACCTCTTAACGGTCGAGATACACCCTCCGCCATTGCCGTCTCAAGGTTCGGTTCGGTTCATGTCGCGCATGGCAGCAAGATAACATCCTTTGATTGGTCCCTTAGACGCAAGTCCACTTTTTTGACGCAATTCATGGCCGTCGATTCTCTATCACCCCTCTCCGATTCGGTGGTGGCTGCGGGTGCCCATGACTATTCGGGGTTGCAAATTATTGATTTGACAAGGAAGGTTATCGAAACGACCTTAGACTGGGAGAACGTGACCAGGTCTGGTTCCACCGTCCTAGCAATCGGGTCTTCGCCGGAGCACCTGTTTGCGAGCTTCGAATCAGGTCGCCGCAATTCAAATTCAATAATGGTATATGATTTACATACTTTTAGCCCCATTACAGAGATTGGTCACAATGAGATCTTTGGTGCCGATATCGATTCCGCGATCCCAGCAACGAAACTGAAATGGGCTTCGGGATACAACTTGCTCATGGCATCTGGGTCTCATAGCGGTCCTTCTGGAGTATCGGGCAACATAAGATTATGGGATGTGAGGTCCGGGAAAGTTGTTTGGGAGGTGATGGAGAAGATAGATTGTTTTGCAGACGTGACGGTTTCAGATAACTTGTCAGTGATCTTCAAGGTTGGGGTACATTCTGGGGAGGCATTTTTCGTGGATATGCGTAATCTAAGCACTGGGAATTCCTGGGTCTGTCTTGGTGACAATAGAAAAGTGTTGAATGGGAAGAAGGAAGGCATAGGATGCAAGGTTGAAGATCAAGGGAATCAAGTGTTCTGCAGCAAGGGAGGAGACATAGAAATGTGGTCAGAGGTTATAACGAGCTCTGCAAAGAAAGGAGAGGAGAAGTTAGATGACAGGATATTCAAGAAGAACTTGATTGGTAGGGTGAAGGACACTGGAGGTTCTAAGATCACCAATCTGGCCTTTGGAGGGAATAAGATGTTCTTGACCAGGAAGGATCAACAATTTGTTGAGGTTTGGCAGAGTTCTACGGTGGAATTTTGA 1392 0.4698 MPPSSTSNPYESPLPKSDSNIVTINVGGQFFQTTKQTLNSAGPKSFFAKIAQFQSSTPFIDRDPELFAVLLSLLRTGNLPSRAKAYDLQDLIFESQFYGIEHTLRNSLSSPSQFEPFNLQKSIVLPLNGRDTPSAIAVSRFGSVHVAHGSKITSFDWSLRRKSTFLTQFMAVDSLSPLSDSVVAAGAHDYSGLQIIDLTRKVIETTLDWENVTRSGSTVLAIGSSPEHLFASFESGRRNSNSIMVYDLHTFSPITEIGHNEIFGADIDSAIPATKLKWASGYNLLMASGSHSGPSGVSGNIRLWDVRSGKVVWEVMEKIDCFADVTVSDNLSVIFKVGVHSGEAFFVDMRNLSTGNSWVCLGDNRKVLNGKKEGIGCKVEDQGNQVFCSKGGDIEMWSEVITSSAKKGEEKLDDRIFKKNLIGRVKDTGGSKITNLAFGGNKMFLTRKDQQFVEVWQSSTVEF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1058 463 Gene3D Potassium Channel Kv1.1; Chain A 14 114 IPR011333 -
Prci10g1058 463 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 175 460 IPR011044 -
Prci10g1058 463 CDD BTB_POZ_KCTD-like 22 98 - -
Prci10g1058 463 Gene3D - 131 461 IPR015943 GO:0005515
Prci10g1058 463 SUPERFAMILY POZ domain 21 106 IPR011333 -
Prci10g1058 463 Pfam BTB/POZ domain 22 103 IPR003131 GO:0051260
Prci10g1058 463 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 16 460 IPR045068 -
Prci10g1058 463 SMART BTB_4 20 115 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1058 Prci-Chr10 7081620 7083367 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1058 - - qsa:O6P43_034257 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1058 10 7081620 7083367 Prci10g1058 10 7081620 7083367 ECH