Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1053 ATGTGGATGTTTGGTTGGAAGGGGCCATCAGGATTCTCAGCCACTTCCACTGCGGAGCAAGTTACTCAAGGAATCGATGGAAACGATCTCACCGCCATCGTCACAGGGGCATCTAGTGGTCTTGGTCTTGAGACCACCCGAGTTCTAGCATTGCGTGGAGTCCATGTGGTTATGGCTGTAAGGAATGTGGACTCTGGTATGAATGTCAAAAACAGAATACTCAAGGAAATCCCCTCTGCTAAAATTGATGTCATGACGTTAGACCTTAGCTCAATGGCATCAGTAAGGAAATTCGCTGCAGATTACAATTCCTCTGGTCTGCCTCTCAATATCCTAATTAATAATGCAGGAATTATGGCTGCCCCATTCACTCTTTCTCAAGACAACATTGAGTTGCAGTTTGCAACCAATCATTTAGGTCATTTCCTGTTAATAAACCTTTTATTGGAAAATATGAAGAAAACTGTGCATGAATGCAAGCGGGAGGGAAGAATAGTTATTCTATCATCAGAGGCACACAGATTTGCATATAATGAAGGGATTCGTTTTGATATGATCAATGATGAATCCAGATACAACAGTTATTTTGCTTATGGACAATCAAAGCTTGCTAATATTTTGCATGCAAAAGAGCTTTCAAGGCGCTTGAAGGAAGAAGGAGTGGAAATAACTGCTAACTCCCTTCATCCGGGGACAATTATAACAAATATTCTTCGGTATCATGGTTTCTTTAATGGTTAG 741 0.4116 MWMFGWKGPSGFSATSTAEQVTQGIDGNDLTAIVTGASSGLGLETTRVLALRGVHVVMAVRNVDSGMNVKNRILKEIPSAKIDVMTLDLSSMASVRKFAADYNSSGLPLNILINNAGIMAAPFTLSQDNIELQFATNHLGHFLLINLLLENMKKTVHECKREGRIVILSSEAHRFAYNEGIRFDMINDESRYNSYFAYGQSKLANILHAKELSRRLKEEGVEITANSLHPGTIITNILRYHGFFNG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1053 246 PANTHER RETINOL DEHYDROGENASE 9 241 - -
Prci10g1053 246 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 240 IPR036291 -
Prci10g1053 246 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Prci10g1053 246 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Prci10g1053 246 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Prci10g1053 246 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Prci10g1053 246 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Prci10g1053 246 Pfam short chain dehydrogenase 31 178 IPR002347 -
Prci10g1053 246 CDD retinol-DH_like_SDR_c_like 31 244 - -
Prci10g1053 246 Gene3D - 24 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1053 Prci-Chr10 7026605 7030468 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1053 19 240 Acyl Lipid Metabolism Gene Families AT1G63380 26.984 1.55e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1053 - K19329 gmx:100785176 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1053 10 7026605 7030468 Prci10g1053 10 7026605 7030468 ECH