Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1008 ATGGAAGCAGATAGCCAATCGAGAAAGGAAAAATATGCTGCTGATATTTCCTCCATAAAGGAAGCACATGCCCGACTAAAATCATTGGTTCATAAAACACCGGTTCTTTCCTCTGAATCTCTGAATGCTATTTCAGGAAGGCAGCTGTACTTTAAGTGTGAATGTTTCCAGAAGGGTGGAGCATTTAAATTTAGAGGTGCCTGCAATGCTGTTTTCTCTCTTGATGATACTGATGCTTCCAAAGGGGTCACAACACACAGCAGTGGTAACCATGCTGCAGCATTGGCTTTGGCGGCAAAGCTAAGGGGGATCCCTGCGTATATTGTTATTCCAAAAGGTGCTCCAACTTGCAAGGTTGAGAATGTAAAGCGTTATGGTGGTCAAGTTATCTGGTCTGAAGCCTCTATGAGGTCCAGGGAGGAAATTGCAAACAAAGTGTGGCAAGAGACTGGTGCTATTTTTATACATCCATATAATGATGGACGTATTTTGAGCGGCCAGGGCACCATATCATTGGAGTTACTGGAACAAGCTCCACAAATAGACACACTAGTAGTTCCCATTAGTGGTGGTGGTCTGATATCAGGAGTAGCATTGGCTGCCAAGTCCATCAACCCTGCTATACGTATTTTAGCTGCTGAACCTAAGGGGGCTGATGACGCTGCACAATCTAAAGCAGCCGGGAGGATAATCACATTGCCTGAAACCAATACTATAGCTGATGGGCTTAGAGCTTTTCTTGGAGATTTAACATGGCCTGTAGTACGAGATCTTGTTGAAGACGTTATAACTGTGGAAGACAGTGAAATAGTAAAAGCCATGAAACTTTGTTTTGAGATTCTTAAGGTTGTCGTTGAACCAAGTGGAGCGATTGGCCTTGCTGCTGTTCTATCGGATGCCTTCCAGAAAAATCCTGCTTGGAAGGACTGCAAACATGTAGGAATTGTAATTTCGGGGGGAAATGTTGATCTTGGCATGCTTTGGAAATCTTTGGAGAAATGA 1002 0.4361 MEADSQSRKEKYAADISSIKEAHARLKSLVHKTPVLSSESLNAISGRQLYFKCECFQKGGAFKFRGACNAVFSLDDTDASKGVTTHSSGNHAAALALAAKLRGIPAYIVIPKGAPTCKVENVKRYGGQVIWSEASMRSREEIANKVWQETGAIFIHPYNDGRILSGQGTISLELLEQAPQIDTLVVPISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSKAAGRIITLPETNTIADGLRAFLGDLTWPVVRDLVEDVITVEDSEIVKAMKLCFEILKVVVEPSGAIGLAAVLSDAFQKNPAWKDCKHVGIVISGGNVDLGMLWKSLEK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1008 333 Gene3D - 25 323 IPR036052 -
Prci10g1008 333 Pfam Pyridoxal-phosphate dependent enzyme 30 319 IPR001926 -
Prci10g1008 333 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 5 326 - -
Prci10g1008 333 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 IPR000634 GO:0006520|GO:0030170
Prci10g1008 333 Gene3D - 62 158 IPR036052 -
Prci10g1008 333 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 16 326 IPR036052 -
Prci10g1008 333 CDD Thr-dehyd 16 323 - -
Prci10g1008 333 FunFam L-threonine dehydratase catabolic TdcB 134 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1008 Prci-Chr10 6843075 6846206 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1008 K12235 - gmx:100799758 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1008 10 6843075 6846206 Prci10g1008 10 6843075 6846206 ECH