Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0992 ATGTTACATCACCCGTGCCTGAAAATGGGAAGAAATGGCCTGGAGAAGTTTGAAGCAACCAATAGATTGTTCAGAAAGAACACAAGCAGCGATTCTTCAAAAATTTTAAAAAAAGGAAATCAGCATCCTGCATGGTTACCTGAGGGCTGGAATGTGGATTTCAGAACTCGAAAAAGTGGTGTACGTGTGGGAACTAGGTATAAGTGCTTCACTGATCCATTGAATAGATTCAAATTCTACTCCAAACCTGAGGTATTACGGTATCTTGAAACTGTAGAGGGCAGCAACTGCACTTTCAAGAAGGGATGCACTGCTAAGCAATCTACAAGCAATCTGTCATCTGCTGCCAAAAGACAGAAACTGAAGCACTCTGCAATCAAACTGCAGCTTGTTGCTGGCAAAGAAGTTTCTGACAGTGTCTTAGAATTGTCAGGTGCCTGCAGCAGCTCAAAAGAAGGGCAAAATATGAAGGTTTCTGCTGAATTTATGGTTTCTCCTGTTTTGACATCTGACTCTGTGGTCAAGATGCATTTGCCTAAGGATGCAGCTGAAGACAGTTCTGAAATTAAACGATCTAATCTAGCTGATGTACAAGAGAAGAATTATATTTTGAATGGAGGGGAGAAGGCTAATGAAGAGAACCCATTTTGCGCAAGCATATCCAAAAACAAGAAGGAATTGAATGTGCCTCACCAGCTTTTGAGACAAGCTGCTGGGAAAGCTGATCAGTTAGCCGACACTGTGACCCATGAACCAGCTCGTCAAGTTCCAAAGAGAAGCTTAAGGAAACGTGTGACACCTATAGATGTTGACTTGAAAAATAAATCATCTCAGCAGTTGAATGTTGTCCCAGAAATTCAGTATGTGCAACAAGCCTGTGGAGAGTTACTCAAGAAAAACAGCAATTGTGAAGTTGAACTAGTTTACAGAGATCAACCATACCAACTAGTACCAGAGAAAATAGGTGACAAAGAGGTAGAACATCAGTACTCTCCATCTCGGGATTTCACTGCACAAAGCCTCAAGGTTGAAATGAAGGCTATTGCATGTGAATTACCTGCTAGGGATGTTTCACATTTTGATCAAAGTTTGGCTTCTGAAGCTAATGTTATGAAAGAAGAGAAATTGCCAGTTGATCAGATTGGAAAAAGTGATGCCTCAGAAATTCATGTTAACTTGAACAAATATAGTAACAGGAAAAATCATTGCAATCCATGCCGGCGAAATTCAAAGCGACTTGCTGGATTAGAACCAGAGGTGATGACCAACTCCATAGTCTGTAAAAGAGCTCCTGAATATAAGAGCAGAAGGTCTAAAAGTAGGGTCAAGGCTATATTGCGGCAAGCTGAGGGTGGGCTGGGTGTTGATGCTGCAGATAATGCTTCTACCTTTATAAATATTCCATTAAATAGAGAGACATCAAATAAAAGCTTAAAATCTCCTAAGATTCCACCCATTACCCATGAGCAACCAGAAAAGTGTGGAGATGAAGAGATAGATTATGTGAAACCAGAATCTCAGCAGCCCATGGCTTGCCAATATTCTTCGTCTGACCAATGCTTGGAATTTGAAATTAAGACTTTCACTGGTGTGCTACCTGTTGAGAATTCAATTGGTAATGGCCCTAATTTGTCTACTGAAGCTATGCTGTTTGACAGTGCTAAAGAAAGCAGCAGTGACAGAAATGCGTTTGTAAATTCAAAAAAATTGAAGAGCAAGAAGGAGTTGCCTTGCCGGTTGTCAAGGAGGCTTGCTGGCCACGAACCTGAGGTAATGCCTGCTTTAAGAGCTCTAGAATATGCAACTAGGAAATCACGAAAAGATAAATCAACTGCAACTGTGGTTTTGAACAATGGAGTTTCTAAGCTAGTTAGTGCTAGCAAAGAACCAGAGGTTATTCTTGATGCACCTAAAAGTTTGTTGAAATCAAGTGTACTTGGTGAACCATCGAACAAGAGTGAAAAGTCATTTGGAGGCCAAAATTTTCCCGAGGATCAGCAGCAGAAGCTTGAAACTGATAGAATTGGTGACAAGAGTTTGGAGACACAAGTTGGCTTACTGTTTGGGATGGAAGCAGAGCATACTCTTCGTGCATCTGACAGCTTGGAAATGAGAGTACTTGAAGAAACATCAAGCAAGAGTGAGAAGCCATATGAAACCCACACTGTTGAAGGATTGAATGAGAGTGTGAAATTATTTGAAACACAAACTATTCACATGGAGCAACTGCAGGAGCTTGAAACTGTGATGATTTCAGAAACACAGCTTTGCTTACCAGTTGAGAAAGAAACAGAGTGTTCACGTCATGCATCTTGCAGTTCAGAACTAAGAGTACTCAGAGACACATCAAACAAGAGTGTGAAGTCATATGAATCTCAAACTATTGAAGAATTGTTACATGAGGACCAAACTGTTGCCAGTGAGCAACGGCAGAAGCTTGAAGCTGAACAACTTGGTGGTGTGATGTCAGAGTCACAAATATGTGAGCAGTTTTGGTCAGATCCGTGCCTAGAATTTGCAATCAAGACCCTAACAGGTACATTGCCTGTGGATGATGCTGCCAACATTTTGCCAGTTATGACTTCTGACAACAATGACCAAGCAGACAAGGAATTGCTTGACGGTGTGGTAAAGAGTCCCAGCGAAGAAGAAAGTTGTGATGACTTGAACCAATCCCAAAATAGTAAATTCATGATGCCTAATTTTTTTTTCCAGCCTTCGAAACAAACTCAGTTGAGGACCAGCTCCCCATTTTGCCAGAATAGGGTGTCTTGTAGTGAAGAAGTTGATATAACCAGGAATTTGAGTGAAGGGGAGCCCCTTTGTATGGAAGACGTGAGTACAAAACTTGCGAGTCATCAGATAACTGGAAGCACAGTAATTCATGAAGAGCCGTCAAAGAAAATTCCTCAGGTTCTTGATGCCGAAGCTGTTCCATCTAAGCAACCACAACTTGAAACTGAAATCATGAGCCGCGAGAAGCCTGAAGCTCAGTTTTGTTATCCGTTTATGGATTCTTGGTCAGACCCAAGTCTAGAATTTGCATTCAAGACTCTCACAGGTGCCACAACAATAGAGGAAGATTTACCAATTCAAGGATGTTTGGGGGAAGCTGGCATTTGGAATGGCCAGAGGGACAGTTACTCGTCGTTGCCAGATTTTGGATTGACGAGTTTTTCTCAAAGTGATATATCATCCTACTACAATTCGGAGGATAGGTCCATACCAGAGCAGCAGCCACAAACAAGCCTTGGCGTGGAGGTTGATCCTCAGAAATATCATTCTCATTGCAATAGGAAAATTCCAAGGTAA 3312 0.4149 MLHHPCLKMGRNGLEKFEATNRLFRKNTSSDSSKILKKGNQHPAWLPEGWNVDFRTRKSGVRVGTRYKCFTDPLNRFKFYSKPEVLRYLETVEGSNCTFKKGCTAKQSTSNLSSAAKRQKLKHSAIKLQLVAGKEVSDSVLELSGACSSSKEGQNMKVSAEFMVSPVLTSDSVVKMHLPKDAAEDSSEIKRSNLADVQEKNYILNGGEKANEENPFCASISKNKKELNVPHQLLRQAAGKADQLADTVTHEPARQVPKRSLRKRVTPIDVDLKNKSSQQLNVVPEIQYVQQACGELLKKNSNCEVELVYRDQPYQLVPEKIGDKEVEHQYSPSRDFTAQSLKVEMKAIACELPARDVSHFDQSLASEANVMKEEKLPVDQIGKSDASEIHVNLNKYSNRKNHCNPCRRNSKRLAGLEPEVMTNSIVCKRAPEYKSRRSKSRVKAILRQAEGGLGVDAADNASTFINIPLNRETSNKSLKSPKIPPITHEQPEKCGDEEIDYVKPESQQPMACQYSSSDQCLEFEIKTFTGVLPVENSIGNGPNLSTEAMLFDSAKESSSDRNAFVNSKKLKSKKELPCRLSRRLAGHEPEVMPALRALEYATRKSRKDKSTATVVLNNGVSKLVSASKEPEVILDAPKSLLKSSVLGEPSNKSEKSFGGQNFPEDQQQKLETDRIGDKSLETQVGLLFGMEAEHTLRASDSLEMRVLEETSSKSEKPYETHTVEGLNESVKLFETQTIHMEQLQELETVMISETQLCLPVEKETECSRHASCSSELRVLRDTSNKSVKSYESQTIEELLHEDQTVASEQRQKLEAEQLGGVMSESQICEQFWSDPCLEFAIKTLTGTLPVDDAANILPVMTSDNNDQADKELLDGVVKSPSEEESCDDLNQSQNSKFMMPNFFFQPSKQTQLRTSSPFCQNRVSCSEEVDITRNLSEGEPLCMEDVSTKLASHQITGSTVIHEEPSKKIPQVLDAEAVPSKQPQLETEIMSREKPEAQFCYPFMDSWSDPSLEFAFKTLTGATTIEEDLPIQGCLGEAGIWNGQRDSYSSLPDFGLTSFSQSDISSYYNSEDRSIPEQQPQTSLGVEVDPQKYHSHCNRKIPR 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0992 1103 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 36 104 IPR001739 GO:0003677
Prci10g0992 1103 PANTHER OS04G0193200 PROTEIN 957 1081 IPR038945 -
Prci10g0992 1103 MobiDBLite consensus disorder prediction 644 665 - -
Prci10g0992 1103 Gene3D - 16 129 - -
Prci10g0992 1103 MobiDBLite consensus disorder prediction 1068 1103 - -
Prci10g0992 1103 MobiDBLite consensus disorder prediction 1068 1088 - -
Prci10g0992 1103 Pfam Methyl-CpG binding domain 44 93 IPR001739 GO:0003677
Prci10g0992 1103 SUPERFAMILY DNA-binding domain 42 98 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0992 Prci-Chr10 6770853 6777865 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0992 - - pcin:129322274 2192.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0992 10 6770853 6777865 Prci10g0992 10 6770853 6777865 ECH