Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0989 ATGACAATCATCAAAAGCTTCCTTATCTGCTCTCTCCTTCTGGCTCTTGCCTTCTCTTTCACCCACGCCGCCAGGTTTGATGTCACCAACAAATGCTCCTACACTGTGTGGGCGGCAGCCGTGCCCGGCGGTGGAAGACAGTTGAACTCCGGCCAGACTTGGAGCTTTGACGTGGCAGCCGGCACCACCGGGGCTCGCATATGGGCACGAACCAACTGCAACTTTGACGGATCGGGTCGTGGACACTGCGAGACAGGTGATTGTGGAGGCTTGCTCCAATGCCAAGCCTATGGATCACCCCCAGACACGCTTGCAGAATTTGCCCTTAACCAATACAATAATATGGACTTCTATGATATTTCATTGGTGGACGGTTTCAATGTTCCCATGGAGTTCAGTCCGACATCTAACGGGTGCACACGTGCCATCCGGTGCACCGCCGACATCATCGGACAGTGCCCTAGCCAGTTGAAAACTCAAGGTGGCTGTAACAATCCCTGCACTGTGTTTAAGACGGATCAGTACTGTTGCAACTCAGGAAGCTGTGAATCCACCGATTATTCTAAGTTCTTTAAGGATAGGTGCCCTGATGCTTATAGTTACCCTAAGGATGATGCTACCAGCACCTTCACTTGTCCTGGAGGAACCAACTACGAGGTTGTTTTTTGCCCTTAA 675 0.5126 MTIIKSFLICSLLLALAFSFTHAARFDVTNKCSYTVWAAAVPGGGRQLNSGQTWSFDVAAGTTGARIWARTNCNFDGSGRGHCETGDCGGLLQCQAYGSPPDTLAEFALNQYNNMDFYDISLVDGFNVPMEFSPTSNGCTRAIRCTADIIGQCPSQLKTQGGCNNPCTVFKTDQYCCNSGSCESTDYSKFFKDRCPDAYSYPKDDATSTFTCPGGTNYEVVFCP 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0989 224 ProSiteProfiles Thaumatin family profile. 23 224 IPR001938 -
Prci10g0989 224 FunFam Thaumatin I 24 224 - -
Prci10g0989 224 CDD TLP-P 26 224 - -
Prci10g0989 224 SMART tha2 26 224 IPR001938 -
Prci10g0989 224 Pfam Thaumatin family 30 224 IPR001938 -
Prci10g0989 224 PIRSF PR5 1 224 IPR001938 -
Prci10g0989 224 PRINTS Pathogenesis-related protein signature 44 53 IPR001938 -
Prci10g0989 224 PRINTS Pathogenesis-related protein signature 116 132 IPR001938 -
Prci10g0989 224 PRINTS Pathogenesis-related protein signature 79 108 IPR001938 -
Prci10g0989 224 PRINTS Pathogenesis-related protein signature 214 223 IPR001938 -
Prci10g0989 224 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Prci10g0989 224 PRINTS Pathogenesis-related protein signature 66 77 IPR001938 -
Prci10g0989 224 ProSitePatterns Thaumatin family signature. 79 94 IPR017949 -
Prci10g0989 224 Gene3D Thaumatin 24 224 IPR037176 -
Prci10g0989 224 PANTHER OS03G0233200 PROTEIN 13 224 IPR001938 -
Prci10g0989 224 SUPERFAMILY Osmotin, thaumatin-like protein 24 224 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0989 Prci-Chr10 6762347 6763222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0989 3 224 Receptor kinase-like Gene Family AT5G38280 33.865 1.94e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0989 - - qsa:O6P43_024211 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0989 10 6762347 6763222 Prci10g0989 10 6762347 6763222 ECH