Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0840 ATGAGCACCGGCGAGCTCCTTAGCATTGAACCTCTAGAACTCAAGTTTCCCTTTGAGTTGAAGAAGCAGATCTCATGCTCCATTCAATTGTCAAATAAGACCGAAAACTATGTGGCTTTCAAGGTCAAAACAACCAACCCGAAGAAATATTGTGTTCGTCCAAACACTGGAATTGTCTTGCCACGATCTACATGTGACGTTATAGTTACCATGCAAGCTCAAAAAGAAGCTCCACCTGACATGCAATGCAAGGATAAATTTCTTCTTCAAAGTGTAAAAACAAATGATGGAACCAATCCGAAGGATATCAATGCAGAAATGTTCAATAAGGAGGCTGGCCGTGTGGTCGAGGAGTGCAAATTAAGAGTGGTGTATGTTTCTCCACCTCAACCACCATCTCCAGTTCCTGAAGGTTCTGAGGAAGGATCATCTCCCAGGGCTTCTGTGTCAGAAAATGGAAATGCCAATGGTCCTGATTTCCCCACAGTAACAAAAGCATTTGCTGACCATCCTGAGGTTCAAGAAAAATCTGGAGAGGCAAAAGCTCTAATCTCGAGGCTGACGGAGGAGAAGAATAATGCAGTTCAACTAAATAACAAGCTTGCCCAGGAACTGGAGCTGCTGAAGCGTGAAGTCAACAAAAGTCACGGTGGAGTTTCTATAGTGTTGGTTATCTTAATTGGTTTGCTCGGCATAATTATGGGGTATCTCATGAAGAAGACCTAA 726 0.4311 MSTGELLSIEPLELKFPFELKKQISCSIQLSNKTENYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTNPKDINAEMFNKEAGRVVEECKLRVVYVSPPQPPSPVPEGSEEGSSPRASVSENGNANGPDFPTVTKAFADHPEVQEKSGEAKALISRLTEEKNNAVQLNNKLAQELELLKREVNKSHGGVSIVLVILIGLLGIIMGYLMKKT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0840 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Prci10g0840 241 FunFam Vesicle-associated protein 1-1 1 129 - -
Prci10g0840 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Prci10g0840 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 238 IPR016763 GO:0005789
Prci10g0840 241 MobiDBLite consensus disorder prediction 126 159 - -
Prci10g0840 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Prci10g0840 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Prci10g0840 241 MobiDBLite consensus disorder prediction 143 159 - -
Prci10g0840 241 Coils Coil 180 214 - -
Prci10g0840 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0840 Prci-Chr10 5693676 5697650 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0840 - - gmx:100527687 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0840 10 5693676 5697650 Prci10g0840 10 5693676 5697650 ECH