Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0773 ATGGACGAAAGCGCCTCTGCGAAAAGATGGCTTCCTCTCGAAGCTAACCCTGATGTGATGAACCAGTTCCTTTGGGGACTGGGCCTTCCAGAAAACGAGGCAGAGTGCTATGATGTGTATGGTCTGGATGAACAACTACTGGAAATGGTTCCCGAGCCTGTACTTGCTGTGCTTTTTCTTTATCCCTTAACCTCAAAGACCGAGGAAGAGCGGTTGCAACAGGAAAATGAAAAAAAGCAGCACAACACTAGAGTATATTTTATGAAGCAAACTGTGGGAAATGCTTGTGGTACCATAGGACTTCTTCATGCTCTTGGGAACATAACATCTGAGATCAAACTTACTGAGGGATCATTCTTTGATAGGTTCTTCAAAGCTACTGCAAGCATGGACCCATTACAGCGTGCAGCATTTCTTGAGAATGACAGAGAAATGGAAGTTGCTCATTCAGTAGCTGCCACTGCTGGTGATACAGAGGCATTGGTTGATGTGAACGCTCATTTCATCTGCTTTGCTTGTGTGGATGGTGAACTTTATGAGCTTGATGGAAGAAAGTCAGGACCTATATCTCATGGTCAATCCTCACCAAATACTCTATTGAGGGATGCAGCTAAAGTCATACAGGGCGTGATCCAGAAAAATCCTGACTCTCTTAACTTCAATGTCATTGTCGTTTCAAAGAAATCTGGAGATGGGAAGTAA 702 0.4387 MDESASAKRWLPLEANPDVMNQFLWGLGLPENEAECYDVYGLDEQLLEMVPEPVLAVLFLYPLTSKTEEERLQQENEKKQHNTRVYFMKQTVGNACGTIGLLHALGNITSEIKLTEGSFFDRFFKATASMDPLQRAAFLENDREMEVAHSVAATAGDTEALVDVNAHFICFACVDGELYELDGRKSGPISHGQSSPNTLLRDAAKVIQGVIQKNPDSLNFNVIVVSKKSGDGK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0773 233 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 162 173 IPR001578 GO:0004843|GO:0006511
Prci10g0773 233 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 178 188 IPR001578 GO:0004843|GO:0006511
Prci10g0773 233 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 12 29 IPR001578 GO:0004843|GO:0006511
Prci10g0773 233 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 50 62 IPR001578 GO:0004843|GO:0006511
Prci10g0773 233 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 90 107 IPR001578 GO:0004843|GO:0006511
Prci10g0773 233 FunFam Ubiquitin carboxyl-terminal hydrolase 4 228 - -
Prci10g0773 233 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 10 211 IPR001578 GO:0004843|GO:0006511
Prci10g0773 233 CDD Peptidase_C12_UCH_L1_L3 10 223 - -
Prci10g0773 233 Gene3D - 4 228 IPR036959 GO:0004843|GO:0006511
Prci10g0773 233 SUPERFAMILY Cysteine proteinases 8 227 IPR038765 -
Prci10g0773 233 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 8 228 IPR001578 GO:0004843|GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0773 Prci-Chr10 5303267 5307115 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0773 K05609 - gmx:100527718 401.749