Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0687 ATGAAAGCAAGGAAAGGAAAACGCTCGGAGGCCTTTTGGCCTTCCCTCGTGATGAAGAAATGGTTAAATATAAAGCCGAAGGTGTACGATTTCAGTGAAGATGAAGTGGAAACTGAAACCGAGAGTGAGGACGACGCTTACTCTGCCAAAGGACCAAGAGTGCGCATGCGTGAAGACAATTCGCATAGAATGCAAAAGATCCAATCAGAATTCTCATGTCAAACATCAGGCAATACTTCATTTCCTCCCGACGATATGCCTTCTAAGGGTTACAAGACAAGACACAGAAGAGGAAAATCAGAAACTCTGCGTGTTCAGTATATTGATACGAAGGAGATAAGGGTAACCGTTGGAACTTGGAATGTTGCTGGAAGAGTTCCCAGTGAAGATCTTGAGATCGATGATTGGCTTTGTACCGATGATCCTGCAGATATGTACATTATTGGTTTCCAAGAAGTAGTCCCTTTGAATGCTGGCAATGTACTGGGAGCAGAGGATAATACACCTATCCCAAAGTGGGAGGCAATCATTCGAAGAACTCTGAACAAATCTTCTCAAACTGAATGCAAAATCAAAAGCTACAGTGCCCCTCCTTCTCCAGTATTGAGGACTTCCTCAGCAGCTGATGTTCTAGCAGACAATATAGATGCTAATCCATTAGATATGATGGGTGAGAAGTTTGTAGAAACCCTAAAAAATAATGAGTTGGAATACCAGGAAGTGAAGAAGGCCATTGATATAGGAAAGAATTTACACTTGAGAAGAATATATGGCATTGATCTTCAGACTAGCCTTGACTGGCCTGAACGCCCATTAGATGCATTCCCTCAAGCTGTCGATTCCAATTCAAAATTGCGGAGAGTACTAAGCAGCTCAGCTAGAATTGGCTTTAATTGGACGGAAAATGCTTTAAGATATGGCGAAGGGATGAAGCGTTCTCACCACAGTCATGGGAACCTAGGCTTGATCTGGAAAGAGGAGAAAGTGATGCCAAGAGAAGTAATTGATTCCCACTCTGATGTATCTGACATATCTGACGAGGAAGATGATACTCTCTTTGAGTTACCAAAGAACCAAGAGGATGATGGATTGGGCACTGTGAAATCACGTCCGAGATATGTTCGAATCGTCAGCAAGCAGATGGTAGGGATATATGTATCAGTTTGGGTGCAAAGGAAGTTGAGAAGGCGCATTAATAATTTGAAAGTTTCTCCCGTTGGAGTTGGTCTAATGGGCTACATGGGAAACAAGGGGTCTGTTTCAGTAAGTATGTCTCTCTTTCAAACACGTCTGTGCTTTGTCTGTTCCCATCTGACTTCTGGTCAAAAGGACGGAGCTGAACATAGGCGAAACTCTGATGTCAATGAAATTCTACGACGCACCTGCTTCTCATCTGTCTTTGATACTGATCAACCACGAACAATCCCATCTCATGATCAGATTTTCTGGTTTGGGGATTTGAATTATCGAATCAGTATGTTGGACAGTGATGCAAGGAAACTGGTGGCTCTGAAGAAGTGGGATGAACTGATGAATAATGATCAGCTAAGCAAAGAACTGCGTCTTGGGCATGTATTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCTCCAACTTACAAGTACGAAATTAACTCTGACAGATATGTTGGTGAGAACCCAAAAGAAGGAGAAAAGAGGAGATCTCCTGCATGGTGCGATCGAATATTGTGGCTAGGAAGAGGAATAAAGCAACTTTCATATGATCGTGCAGACATAAGGATATCAGATCATCGACCAGTTCGTTCAATATTCTCTCTAGAAGTTGAAATATTTGACCATCGCAAGCTTCAAAGAGCTCTAAATGTCAACAGTGCAGCAGTACATCCTGAAGTCTTCCTTCATGAAGAAGGGGAATTGATGCATTAA 1908 0.4235 MKARKGKRSEAFWPSLVMKKWLNIKPKVYDFSEDEVETETESEDDAYSAKGPRVRMREDNSHRMQKIQSEFSCQTSGNTSFPPDDMPSKGYKTRHRRGKSETLRVQYIDTKEIRVTVGTWNVAGRVPSEDLEIDDWLCTDDPADMYIIGFQEVVPLNAGNVLGAEDNTPIPKWEAIIRRTLNKSSQTECKIKSYSAPPSPVLRTSSAADVLADNIDANPLDMMGEKFVETLKNNELEYQEVKKAIDIGKNLHLRRIYGIDLQTSLDWPERPLDAFPQAVDSNSKLRRVLSSSARIGFNWTENALRYGEGMKRSHHSHGNLGLIWKEEKVMPREVIDSHSDVSDISDEEDDTLFELPKNQEDDGLGTVKSRPRYVRIVSKQMVGIYVSVWVQRKLRRRINNLKVSPVGVGLMGYMGNKGSVSVSMSLFQTRLCFVCSHLTSGQKDGAEHRRNSDVNEILRRTCFSSVFDTDQPRTIPSHDQIFWFGDLNYRISMLDSDARKLVALKKWDELMNNDQLSKELRLGHVFDGWKEGLINFPPTYKYEINSDRYVGENPKEGEKRRSPAWCDRILWLGRGIKQLSYDRADIRISDHRPVRSIFSLEVEIFDHRKLQRALNVNSAAVHPEVFLHEEGELMH 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0687 635 SMART i5p_5 302 606 IPR000300 GO:0016791|GO:0046856
Prci10g0687 635 SUPERFAMILY DNase I-like 105 617 IPR036691 -
Prci10g0687 635 Gene3D Endonuclease/exonuclease/phosphatase 333 625 IPR036691 -
Prci10g0687 635 MobiDBLite consensus disorder prediction 66 83 - -
Prci10g0687 635 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 17 619 IPR045849 GO:0004445
Prci10g0687 635 MobiDBLite consensus disorder prediction 32 96 - -
Prci10g0687 635 FunFam Type I inositol polyphosphate 5-phosphatase 2 93 205 - -
Prci10g0687 635 FunFam Type I inositol polyphosphate 5-phosphatase 2 310 624 - -
Prci10g0687 635 Gene3D Endonuclease/exonuclease/phosphatase 94 197 IPR036691 -
Prci10g0687 635 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0687 Prci-Chr10 4596568 4602539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0687 366 606 Acyl Lipid Metabolism Gene Families AT1G65580 31.095 2.83e-35 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0687 K24221 - ccaj:109800886 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0687 10 4596568 4602539 Prci5g0406 5 5449409 5457747 CCT