Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0347 ATGACGCCCTCTTACTGCGTGAGGGAGAGAAAGCCATGTGTGCGTTGGGTTGAGAAGTACTTCAAGGACTGCCTCTGTAATCTCAAAGACGAATTCTCGTTCTCTTTCGGGCTCGTCAGTCTCGTTTGCTGGGGGGTCGCAGAAATTCCTCAGATTATCACCAACTTCCACACCAAGTCCAGCCATGGGGTTTCCCTTGCCTTTCTCCTCACTTGGGTCGCTGGAGATATATTCAATCTGGTGGGTTGTCTTCTGGAGCCAGCCACGCTGCCCACTCAGTTATACACAGCTCTGCTGTACACAACAACTACAATTGTATTAGTACTGCAAAGCTTGTATTATGATTACATCTACAAATGTTGCAGACGAAGTCGGCAGAAAAACAATTACCAAGAGGATGAAGAAGAGAAAAAAGCACTGAGACCGAAACCGAGACACGAGTCTGGAGTTGCAATACCAGATGGCACGCACAAAACATCGCCAGCCCCTCGAAGGGAGATGTTCTATTATACGTCAGCGAGATCTCTGGCTGGGAGCGGCACCCCACCCTTCCGCACCTACATCCGAGCAGCCAAGAGTGGCCCTTCCGCCCTGGAATTCATCTCTGACTCCTCCTCCGACGATGAGGCTCATCCGTCTTACTCCAACAACTCTCCCTCCCAACCTCGACCCATCCCTCGTTCTTTTGCCGCAGGCTATGGAACATTTTTAGCAGCATCGGTTAACTTGCCCATGCAGGGCAATGCAAGGAAACTGTTACAGCAGGAGCACGAGGCGCACAGTACCTTTGGTCAATGGTTGGGATGGCTCATGGCTGCCATATACATGGGAGGCCGACTCCCTCAAATTTGGTTGAATATTAAAAGAGGGAGTGTAGAGGGCTTGAACCCTCTCATGTTCGTCTTTGCTTTGATTGCCAATGTAACCTACGTGGCGAGTATTCTTGTACGAACAATTGAATGGGAGAGCATCAAAGCAAATATGCCATGGTTGTTGGATGCTGTAGTTTGCGTGGCCCTGGACCTATTTATAATAGTGCAGTATATCTATTATAGATACATCCGAAAGAGATGGGTAAGGCACGAGAATGGTGGAGGCTACAAAGAAGCAAGCAAAAGCGGTTCATCCTGA 1131 0.4898 MTPSYCVRERKPCVRWVEKYFKDCLCNLKDEFSFSFGLVSLVCWGVAEIPQIITNFHTKSSHGVSLAFLLTWVAGDIFNLVGCLLEPATLPTQLYTALLYTTTTIVLVLQSLYYDYIYKCCRRSRQKNNYQEDEEEKKALRPKPRHESGVAIPDGTHKTSPAPRREMFYYTSARSLAGSGTPPFRTYIRAAKSGPSALEFISDSSSDDEAHPSYSNNSPSQPRPIPRSFAAGYGTFLAASVNLPMQGNARKLLQQEHEAHSTFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALIANVTYVASILVRTIEWESIKANMPWLLDAVVCVALDLFIIVQYIYYRYIRKRWVRHENGGGYKEASKSGSS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0347 376 FunFam Vacuolar membrane PQ loop repeat protein 263 361 - -
Prci10g0347 376 SMART ctns 277 308 IPR006603 -
Prci10g0347 376 SMART ctns 46 77 IPR006603 -
Prci10g0347 376 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 355 - -
Prci10g0347 376 MobiDBLite consensus disorder prediction 130 152 - -
Prci10g0347 376 MobiDBLite consensus disorder prediction 199 224 - -
Prci10g0347 376 Pfam PQ loop repeat 32 88 IPR006603 -
Prci10g0347 376 Pfam PQ loop repeat 264 319 IPR006603 -
Prci10g0347 376 MobiDBLite consensus disorder prediction 130 164 - -
Prci10g0347 376 Gene3D - 263 362 - -
Prci10g0347 376 Gene3D - 35 136 - -
Prci10g0347 376 MobiDBLite consensus disorder prediction 199 225 - -
Prci10g0347 376 FunFam PQ-loop repeat family protein / transmembrane family protein 32 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0347 Prci-Chr10 2385952 2389278 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0347 K23678 - gmx:100789634 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0347 10 2385952 2389278 Prci10g0347 10 2385952 2389278 ECH