Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0345 ATGCCTGCACCTTCACCGACGTCGACTTTCATCTGTATCTTCCTTTTCTTCACCACTAGCTGTGCCGCCCTTGCTGCTCCGCGCTTCAAAGAAGCCCCAAAGTTCTACAACTCCCCCAACTGCTCTGACGACGCTATCCACGTAGCGATGACCCTCGACGTCACCTACCTTCGCGGCTCAATGGCCGCCATCCTCTCCGTCCTCCAACACTCTTCCTGTCCCGAGAACGTCGTTTTCCATTTTGTCTCCGCCGCTTCCATGCTTTCTTCCGCTCCCATCCTCAACCTCACCATCTCCGCCTCCTTCCCGTACCTCAAATTCCGAATCTACCCCTTCGATGACGTCACCGTCGCTGGGCTAATCTCCTCTTCCATCCGCACCGCATTGGACTGCCCTCTCAACTATGCCCGCAACTACCTCCCCAATCTCCTCCCTCCTTCTGTCCGCAAAGTCGTCTACCTCGACTCCGACTTGGTCCTCTTCAATGACATTGCAGAACTAGCTGCCACTCCGATGGGCTCCAACCAGGTCCTTGCTGCTCCCGAATACTGCAACGCCGATTTCACCGCCTACTTCACGCCGACGTTTTGGTCCAATCCGTCCTTGTCGCTCACGTTTGCGGGTCGCGGACCTTGCTATTTCAACACCGGGGTGATGGTGATCGATTTGGAGCGGTGGCGTGCCGGCGATTACACAAGGAAGATTGAGGAGTGGATGGAACTGCAGAAAAGGATTCGGATCTACGAGCTGGGATCACTGCCGCCGTTCCTGCTGGTGTTCGCCGGGAACATAGCGCCGGTGGATCACAAGTGGAATCAACATGGGCTCGGCGGCGACAACTTTAGTGGGCTTTGCAGGGATTTGCATCCGGGCCCGGTGAGCCTGTTGCACTGGAGCGGGAAGGGTAAGCCCTGGGTTCGGCTAGACGCCAACAGGCCTTGCCCTCTGGATGCCCTATGGGCTCCCTACGATCTGTTAGAGACGCCCGTCGCTCTGGATGCTTAG 1005 0.5721 MPAPSPTSTFICIFLFFTTSCAALAAPRFKEAPKFYNSPNCSDDAIHVAMTLDVTYLRGSMAAILSVLQHSSCPENVVFHFVSAASMLSSAPILNLTISASFPYLKFRIYPFDDVTVAGLISSSIRTALDCPLNYARNYLPNLLPPSVRKVVYLDSDLVLFNDIAELAATPMGSNQVLAAPEYCNADFTAYFTPTFWSNPSLSLTFAGRGPCYFNTGVMVIDLERWRAGDYTRKIEEWMELQKRIRIYELGSLPPFLLVFAGNIAPVDHKWNQHGLGGDNFSGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLETPVALDA 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0345 334 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 47 314 IPR029044 -
Prci10g0345 334 SUPERFAMILY Nucleotide-diphospho-sugar transferases 46 325 IPR029044 -
Prci10g0345 334 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 13 327 - -
Prci10g0345 334 FunFam Hexosyltransferase 47 314 - -
Prci10g0345 334 Pfam Glycosyl transferase family 8 47 307 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0345 Prci-Chr10 2378567 2379860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0345 10 328 Glycosyltransferase AT3G50760 69.970 2.65e-171 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0345 K20893 - qsa:O6P43_024721 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0345 10 2378567 2379860 Prci10g0345 10 2378567 2379860 ECH