Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0280 ATGAGTGCCGTAAGATTATCATCATGCGTTGCCACGGCTGCGGCCGTGGCTGCCATGTTCAGTCTCTCCAATAAGGCTTACGCCGAGACCTCCTTTCGGTTCCCTTTTCTCTCTCCTTCGTCCACTAATTCAGCTCCCCTGGAAGATCAGGATTCTGATACCAAGTCAGAATCTCAAGCTGCTGATGAACCCAAAAAGTCCGGTTTTGACCCGGAATCGTTAGAACGAGGGGCAAAAGCTCTCCGCGAAATCAATGCTTCTCCGTATTCTAAACAGGTGTTTGATTTAATGAGAAAGCAGGAAAAAACTCGCCTTGCTGAGTTAGATGCCGAGAAAGTTCATTATGAACTAATTCAGTCTCAAGTTGATATTGATAGGCAGCGGAAGTTAGCTGAAGAACAACGAAATCTTATACAGGAGCAGGCCCAGAGGCAGGCCCAGGTGCTGCGATATGAAGATGAATTGGCCAGGAAAAGAATGCAGGCAGATCATGAAGCTCAGAGACGACATAATGTTGAATTGGTGAAGATGCAAGAGGAGTCCTCAGTTCGAAAGGAACAGGCAAGGCGAGCTACTGAAGAACAGATTCAAGCTCAGCAGCGTCAAACGGAGAGAGAGCGAGCTGAAATAGAAAGGGAAACCATAAGAGTTAAGGCCATGGCAGAGGCAGAGGGCCGAGCCCATGAAGCCAAGCTTACTGAGGAGCATAATAGTAGAATGCTTAGAGACCAGATGCGGGGTGAAAGAGACAAATGGCTTGCTGCAATTAACACAACTTTTAGTCATATTGAAGGTGGCTTAAGGGTCTTATTGACTGATAGGGAAAAGTTGCTTATGACTGTGGGAGGGGCCACGGCATTAGCTGCAGGAGTATATACAACTAGAGAAGGCGCTAAAGTGACGTGGGGCTACATTAATCGGATTTTGGGGCAGCCATCATTGATCCGGGAATCATCCATTGCAAAATTTCCAGGGTCAAGGATTATATCTCAAGCCAAAAATAAAGCTTTAAGTTATAGTACCATGGCCAAGGCAGAAAATTTTTCTGAGAGTAAAACTGGCCTTGAAAATGTGGTACTACATCCATCACTGCAGAGAAGAATAGAGCATCTTGCACGGGCTACATCAAATACCAAGGCCCACCAGGCACCATTCCGTAATATGCTCTTCTATGGCCCTCCTGGTACCGGTAAAACCATGGTTGCAAGGGAAATTGCTAAAAAATCGGGTTTAGATTATGCTATGATGACTGGAGGAGATGTTGCACCCCTGGGCCCACAGGCTGTTACCAAAATCCATGAGATATTTGATTGGGCCAAGAAATCTAGAAAAGGCTTGCTACTTTTTATTGATGAGGCTGATGCTTTCCTTTGTGAGCGCAACAGCACACACATGAGCGAAGCTCAACGAAGTGCTCTAAATGCATTGCTCTTCAGAACTGGCGATCAGTCAAGAGACATAGTGCTTGTCCTTGCCACAAACAGACCGGGTGACCTTGACAGCGCGGTGACTGACCGCATCGACGAGGTGATTGAATTCCCACTTCCTGGGGAGGAGGAGCGTTTCAAATTGCTGAAGCTCTATTTGAACAAATACCTGAGCGGAGAAGACAATGGCAGCTCATCCATACTCAGGAAACAAGCCCAAAAAATAATCATGAAGAATATATCAGAGGATGTGCTGAGGGAGGCTGCGATGAAAACGGCGGGATTCTCAGGTCGTGAGATAGCCAAATTGATTTCCGGCATCCGAGCAGCCGTGTATGGACGCCCAGACTGCACTTTGGATTCTCAGTTGTTTAGAGAAATGGTAGATTACAAGGTCGGGGAACATCACCAACGTATAAAACTGGCGGCTGAAGGCGGTCTTCCTGACAATTTTTAG 1884 0.466 MSAVRLSSCVATAAAVAAMFSLSNKAYAETSFRFPFLSPSSTNSAPLEDQDSDTKSESQAADEPKKSGFDPESLERGAKALREINASPYSKQVFDLMRKQEKTRLAELDAEKVHYELIQSQVDIDRQRKLAEEQRNLIQEQAQRQAQVLRYEDELARKRMQADHEAQRRHNVELVKMQEESSVRKEQARRATEEQIQAQQRQTERERAEIERETIRVKAMAEAEGRAHEAKLTEEHNSRMLRDQMRGERDKWLAAINTTFSHIEGGLRVLLTDREKLLMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSIAKFPGSRIISQAKNKALSYSTMAKAENFSESKTGLENVVLHPSLQRRIEHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIAKKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSRKGLLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERFKLLKLYLNKYLSGEDNGSSSILRKQAQKIIMKNISEDVLREAAMKTAGFSGREIAKLISGIRAAVYGRPDCTLDSQLFREMVDYKVGEHHQRIKLAAEGGLPDNF 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0280 627 Pfam ATPase family AAA domain-containing protein 3, N-terminal 50 316 IPR021911 -
Prci10g0280 627 SMART AAA_5 384 517 IPR003593 GO:0016887
Prci10g0280 627 Coils Coil 124 144 - -
Prci10g0280 627 PANTHER PUTATIVE ATP-ASE 22 620 - -
Prci10g0280 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 606 IPR027417 -
Prci10g0280 627 Coils Coil 182 216 - -
Prci10g0280 627 Pfam ATPase family associated with various cellular activities (AAA) 388 515 IPR003959 GO:0005524|GO:0016887
Prci10g0280 627 MobiDBLite consensus disorder prediction 50 73 - -
Prci10g0280 627 ProSitePatterns AAA-protein family signature. 487 506 IPR003960 GO:0005524|GO:0016887
Prci10g0280 627 Gene3D - 330 532 IPR027417 -
Prci10g0280 627 MobiDBLite consensus disorder prediction 41 73 - -
Prci10g0280 627 MobiDBLite consensus disorder prediction 162 192 - -
Prci10g0280 627 FunFam ATPase family AAA domain-containing protein 3 342 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0280 Prci-Chr10 1796542 1802496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0280 364 589 Miscellaneous Gene Families AT5G53170 30.213 1.08e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0280 K17681 - gmx:100777755 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0280 10 1796542 1802496 Prci10g0280 10 1796542 1802496 ECH