Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0183 ATGGCGTCCCAGAACAAGCCCGCTGGATCTGGATCTGGATCTTCTCCCGCAGCCGCTAATGGCGACGTTTCTCCTCCGCGCACGGTGGCATTGATTGCCGGCATCACCGGCCAAGATGGTTCCTACCTCACTGAATTCCTCCTTGACAAAGGCTACGAAGTCCATGGCCTTATTCGCCGCTCCTCTAACTTCAACACCCAACGAATCAATCACATCTACATCGATCCACACAACACCCACAAGGCTCGAATGAAGCTTCATTATGCGGATCTCACCGATGCCTCTTCCCTTCGTCGATGGCTCGACACAATCCTCCCCGATGAGGTTTACAATCTCGCTGCCCAGTCGCATGTCGCCGTTTCCTTCGAGATCCCCGATTATACCGCCGATGTTGTCGCCACTGGTGCTCTCCGACTCTTGGAGGCTGTTCGCTCCCACATCGCCACCACCGGTCGCAGCCATATTCGCTATTACCAAGCCGGATCATCGGAAATGTTCGGTTCCACCCCACCTCCGCAATCGGAGACTTCCCCATTTCATCCTCGGTCTCCTTATGCGGCGTCGAAATGCGCCGCCCATTGGTACACCGTCAATTACCGCGAGGCTTATGGGCTCTTTGCCTGCAATGGGATACTCTTCAATCACGAATCGCCGAGGCGAGGTGAGAATTTCGTAACCCGGAAGATCACGCGGGCTGTGGGTCGGATCAAGTTCGGCCTGCAGCGCAAATTGTTCTTGGGGAATTTGCAGGCTTCGAGGGATTGGGGTTTTGCTGGGGATTATGTGGAGGCTATGTGGATGATGCTGCAGCAGGATAAGCCGGACGATTACGTTGTGGCCACGGAGGAATCCCACACAGTGGAAGAGTTTTTGGAGGTTGCATTTGGACACGTGGGTTTGAATTGGAGGGATCATGTGGAGATTGACAAGAGGTACTTCAGGCCAGCAGAGGTCGACAATCTCAAGGGGGATTCTAGCAAGGCTAGGAAAGTGCTTGGGTGGAAGCCCAGGGTGGGATTTGAGCAGTTGGTGAAGATGATGGTGGACGAGGACATTGAATTGGCCAAGAGGGAGAAGGTGCTTGTCGATGCTGGCTACTTGGATGCTCAGCAACAGCCTTGA 1122 0.5428 MASQNKPAGSGSGSSPAAANGDVSPPRTVALIAGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRINHIYIDPHNTHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIATTGRSHIRYYQAGSSEMFGSTPPPQSETSPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKFGLQRKLFLGNLQASRDWGFAGDYVEAMWMMLQQDKPDDYVVATEESHTVEEFLEVAFGHVGLNWRDHVEIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLVDAGYLDAQQQP 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0183 373 Gene3D - 221 347 - -
Prci10g0183 373 Gene3D - 31 337 - -
Prci10g0183 373 MobiDBLite consensus disorder prediction 1 21 - -
Prci10g0183 373 PANTHER GDP-MANNOSE 4,6-DEHYDRATASE 8 363 IPR006368 GO:0008446|GO:0019673
Prci10g0183 373 Pfam GDP-mannose 4,6 dehydratase 31 347 IPR016040 -
Prci10g0183 373 FunFam GDP-mannose 4,6-dehydratase 31 229 - -
Prci10g0183 373 NCBIfam GDP-mannose 4,6-dehydratase 29 354 IPR006368 GO:0008446|GO:0019673
Prci10g0183 373 CDD GDP_MD_SDR_e 29 353 - -
Prci10g0183 373 MobiDBLite consensus disorder prediction 1 23 - -
Prci10g0183 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 353 IPR036291 -
Prci10g0183 373 Hamap GDP-mannose 4,6-dehydratase [gmd]. 28 357 IPR006368 GO:0008446|GO:0019673
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0183 29 213 Miscellaneous Gene Families AT4G12250 28.205 3.70e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0183 K01711 - cit:102613014 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0183 10 1176196 1178146 Prci10g0183 10 1176196 1178146 ECH