Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0160 ATGGCGGACTCTCTGAAGCAAATCTTGGCAAAACCAATCCAGCTAGCCGACCAAGTAATCAAAGCAGCCGATGAGGCGAGCGCTTCCTTCAGGCACGAATGCGCGGAGCTCAAATACAAATCCGAGAGACTCGCGGGGCTTCTCCGGCAGGCCGCGAGAGCCAGCTCCGATCTCTACGAACGTCCTACGAGGCGGATCATCGATGAAACTGAACAGGTCCTCACCAAAGCCCACTCCTTGATTCTTAAATGCCGCGCTAATGGCCTAGTGAAGCGCGTGTTCAGCATCATACCCGCCGCCGCCTTTCGTAAGATGTCTACCCAGCTCGAGAACTCAATCGGAGACGTGTCCTGGCTCCTTCGCGTGTCCGCTCCGGCGGGGGATCGCGGTGACGAGTATCTGGGTCTTCCTCCGATCGCGGCAAACGAACCGAATCTGTATCTCATATGGGAGCAGGTGGCGACTCTTTACACGGGTTCTCTGGAGGAGCGATCTGATGCGGCGGCTTCGCTGGTGTCACTTGCTCGGGACAACGATCGATACGGGAAGTTGATAATCGAGGAAGGTGGGGTTGGACCGCTGCTGAAATTGCTCAAAGAGGGTAAGATAGAAGGTCAAGAGAATGCTGCGAGAGCAATGGGCCTTCTGGGTCGTGACCCCGAGAGCGTCGAGCACCTGCTCCACGCCGGAATATGCTCTGTGTTTGCCAAAATCCTTAAAGATGGTCCCATGAAAGTGCAAGCTGTGGTGGCCTGGGCTGTGTCGGAGCTGGCGGCGAATTATCCCAAATGCCAAGATCTCTTTGCTCAGCACAATATAATCCGATTACTCGTCAGCCATCTTGCATTTGAAACCGTTCAAGAACACAGTAAGTATGCCATTGATCGCATCAAACCTACGTCAATCCACGCCGTTGTGATGGCAAGTAGTAATTCTAACTCTAATAACACCAATACCAAAAAGTCCAACGAGGAAGACGAGAATCAGGTTAAGAGTCGGATGCTGCATCCATTACATCCATTGGGTAATGGAACAGCTTCTGAGCTGCATCGAGTGATCACAAGTACCATGGCAATGAATGCTACTTCCAAGTCTGATGAAGGAATTCAGAATCAGAACTCCCAAACCAATCAACCCAAGAGCAATGGTCTGAGTAACGGGAAACAAACTCATCAACCGCATCACCAGCCTAGCTACTCACATTCGGGTATTAACATGAAGGGAAGGGAACTGGAGAACCCTGAGACTAAGGCCAATATGAAAGCAATGGCGGCGAGAGCGCTGTGGCACCTAGCCAAGGGTAACTCACCCATTTGTCGTAGCATCACAGAATCAAGGGCTCTCCTGTGCTTTGCAGTTCTCCTTGAGAAAGGACGTCAAGATGTGCAGTTCAATTCTGCTATGGCGGTGATGGAGATCACTGCAATGGCAGAGGAAGATGCGGATCTGAGAAGATCTGCGTTCAAGCCTAACTCTCCTGCATGCAAAGCAGTGGTTGATCAAGTGCTTAAGGTCATAGAGAAGGCAGATTCAGACCTGTTGATTCCTTGCATGAAGGCTGTTGGGAATTTAGCGAGGACATTTAGAGCAACGGAGACAGGGATGATTGCTCCCTTAGTGCGACTCTTGGATGAAAGAGAAGCAGAGGTATCAAGAGAGGCATGTATAGCCCTCACCAAATTTGCCTGCTCGGAGAACTACCTTCACCTGGATCACTCCAAGGCGATAATAAGTGCTGGTGGGGCAAAACATTTGGTACAGCTTGTGTATTTTGGAGAACAGATCGTTCAGATTTCAGCACTAGTTTTGCTCTGCTACATAGCACTGCATGTCCCAGACAGTGAAGAACTCGCCAAGGCTGAGGTGCTCACGGTGCTGGAATGGGCATCCAAGCAATCCTCCATGACGCAGGAGGAAACAATCGAGGCGTTGTTGCAAGAAGCCAGGAGTAGGTTGGAGCTTTACCAGTCTAGAGGTTCAAGAGGATTCCATTGA 1995 0.5073 MADSLKQILAKPIQLADQVIKAADEASASFRHECAELKYKSERLAGLLRQAARASSDLYERPTRRIIDETEQVLTKAHSLILKCRANGLVKRVFSIIPAAAFRKMSTQLENSIGDVSWLLRVSAPAGDRGDEYLGLPPIAANEPNLYLIWEQVATLYTGSLEERSDAAASLVSLARDNDRYGKLIIEEGGVGPLLKLLKEGKIEGQENAARAMGLLGRDPESVEHLLHAGICSVFAKILKDGPMKVQAVVAWAVSELAANYPKCQDLFAQHNIIRLLVSHLAFETVQEHSKYAIDRIKPTSIHAVVMASSNSNSNNTNTKKSNEEDENQVKSRMLHPLHPLGNGTASELHRVITSTMAMNATSKSDEGIQNQNSQTNQPKSNGLSNGKQTHQPHHQPSYSHSGINMKGRELENPETKANMKAMAARALWHLAKGNSPICRSITESRALLCFAVLLEKGRQDVQFNSAMAVMEITAMAEEDADLRRSAFKPNSPACKAVVDQVLKVIEKADSDLLIPCMKAVGNLARTFRATETGMIAPLVRLLDEREAEVSREACIALTKFACSENYLHLDHSKAIISAGGAKHLVQLVYFGEQIVQISALVLLCYIALHVPDSEELAKAEVLTVLEWASKQSSMTQEETIEALLQEARSRLELYQSRGSRGFH 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0160 664 Gene3D - 151 331 IPR011989 -
Prci10g0160 664 PANTHER ARMADILLO REPEAT ONLY 4 1 660 - -
Prci10g0160 664 FunFam Armadillo repeat only 4 2 122 - -
Prci10g0160 664 Pfam Armadillo/beta-catenin-like repeat 184 214 IPR000225 GO:0005515
Prci10g0160 664 MobiDBLite consensus disorder prediction 309 331 - -
Prci10g0160 664 MobiDBLite consensus disorder prediction 363 406 - -
Prci10g0160 664 MobiDBLite consensus disorder prediction 363 403 - -
Prci10g0160 664 Coils Coil 638 658 - -
Prci10g0160 664 SMART arm_5 177 218 IPR000225 GO:0005515
Prci10g0160 664 SMART arm_5 219 259 IPR000225 GO:0005515
Prci10g0160 664 SMART arm_5 569 609 IPR000225 GO:0005515
Prci10g0160 664 SMART arm_5 435 475 IPR000225 GO:0005515
Prci10g0160 664 SMART arm_5 523 563 IPR000225 GO:0005515
Prci10g0160 664 FunFam Armadillo repeat only 2 151 322 - -
Prci10g0160 664 FunFam Armadillo repeat only 2 398 652 - -
Prci10g0160 664 Gene3D - 409 490 IPR011989 -
Prci10g0160 664 SUPERFAMILY ARM repeat 155 636 IPR016024 -
Prci10g0160 664 Gene3D - 3 122 IPR036537 GO:0007166
Prci10g0160 664 Gene3D - 491 646 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0160 Prci-Chr10 1018656 1021317 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0160 - - qsa:O6P43_024874 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0160 10 1018656 1021317 Prci10g0160 10 1018656 1021317 ECH