Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0074 ATGTATGAGCTGCATTTTGCAGTACCAATGGCTGGAGCAATTCTTTGCACTCTAAATTCACGTCTTGATGGAGCTATGGTTTCAGTTCTTCTAGAACATTCACAAGCAAAGGTTCTCTTTGTAGATTACCAATTGCTCGAAGTTGCAAGGATAGCATTGAAACTGCTAAGCAAGAGAGTTAGAAACTTGCCTACTTTAGTTCTAATCACTGATTGTGACTGCTCGTCTACCATTGACACTACTTCAGTCAGTTGTGAGTATGAGGAGCTACTAGCTATGGGGCATAGTGGGTTTGAGATTGTGAGACCAAATAGTGAATTTGATCCTATAAGTGTGAATTACACCTCAGGCACCACGTCTAGGCCAAAAGGGGTTCTCTATAGTCACAGGGGTGCCTATTTGAATACTCTAGGAACTATTCTTCTCTTTGGGATGGGGTTTATGCCTGTTTATCTTTGGACTGTGCCTATGTTTCACTGCAACGGGTGGTGTTTGCCTTGGGGAGTGGCAGCTCAATGTGGGACCAATGTGTGTCTAAGGAAAGTCTCGCCAAAGGACATTTTTGAAAAGGTGACACAGCATAAAGTGACACACATGGGCGGAGCTCCTACAGTTTTAAACATGATTGTGAACTCTGCATGGACTGATAGAAGGCCACTTACCCACAAGGTGGTGGTGATGACTGGGGGTTCTCCACCACCACCACAAGTCTTATCCAAGATGGAAGAGATTGGCTTTAGTGTATCTCACCTTTATGGCCTAACAGAAACATATGGTCCTGGGACTTCTTGTGAGTGGAGACTTGAGTGGGATTCCATGGCTCTTGAAGAAAAATACAAGAGAAAAGCTAGACAAGGAATCCCCCACGTGGCTTTGGATGCAATTGACGTAAAAGATCCGAATACTATGGAAAGCGTTCCAGCCGATGGCGAAACAACGGGTGAGGTAATGTTTAGAGGAAATACAGTGATGAGTGGATATTTGAGAGATTCAGAAGCAACAAAGGAAGCTTTCAGAGGTGGGTGGTTTCATAGCGGAGATGTGGGAGTGAAACACTCTGATGGCTATTTGGAAATTAAGGATAGATTAAAGGACATTATAATATCAGGGGGAGAGAATATTAGCTCAGTGGAGGTCGAAACAGTTTTATATAGCCATCCAGCAATTCTTGAAGCCGCAGTTGTAGCTAGACCAGATGACCATTGGGGGCAAACACCTTGTGCATTTGTGAGTTTGAAAAAAGGATTTACTGCAGATGCTCGAGAAATAATTGATTTTTGTCGAAGTCAATTACCACCTTACATGGCTCCAAAAACTATTGTTTTCGAGGACCTGCCAAAAACTGCAACAGGAAAGATACAAAAATATGTTTTGAGGGAGAAAGCTAAGGCCATGGGCAGCCTTACTAGACCACCTAATACAATGGAGCCCAATTAG 1437 0.4322 MYELHFAVPMAGAILCTLNSRLDGAMVSVLLEHSQAKVLFVDYQLLEVARIALKLLSKRVRNLPTLVLITDCDCSSTIDTTSVSCEYEELLAMGHSGFEIVRPNSEFDPISVNYTSGTTSRPKGVLYSHRGAYLNTLGTILLFGMGFMPVYLWTVPMFHCNGWCLPWGVAAQCGTNVCLRKVSPKDIFEKVTQHKVTHMGGAPTVLNMIVNSAWTDRRPLTHKVVVMTGGSPPPPQVLSKMEEIGFSVSHLYGLTETYGPGTSCEWRLEWDSMALEEKYKRKARQGIPHVALDAIDVKDPNTMESVPADGETTGEVMFRGNTVMSGYLRDSEATKEAFRGGWFHSGDVGVKHSDGYLEIKDRLKDIIISGGENISSVEVETVLYSHPAILEAAVVARPDDHWGQTPCAFVSLKKGFTADAREIIDFCRSQLPPYMAPKTIVFEDLPKTATGKIQKYVLREKAKAMGSLTRPPNTMEPN 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0074 478 Pfam AMP-binding enzyme C-terminal domain 378 452 IPR025110 -
Prci10g0074 478 CDD ttLC_FACS_AEE21_like 1 460 - -
Prci10g0074 478 FunFam 2,3-dihydroxybenzoate-AMP ligase 364 466 - -
Prci10g0074 478 Gene3D - 364 466 IPR045851 -
Prci10g0074 478 ProSitePatterns Putative AMP-binding domain signature. 112 123 IPR020845 -
Prci10g0074 478 Pfam AMP-binding enzyme 2 369 IPR000873 -
Prci10g0074 478 SUPERFAMILY Acetyl-CoA synthetase-like 2 464 - -
Prci10g0074 478 PANTHER ACYL-ACTIVATING ENZYME 1 468 - -
Prci10g0074 478 Gene3D - 1 363 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0074 Prci-Chr10 522594 524595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0074 1 470 Miscellaneous Gene Families AT1G20560 62.712 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0074 - - gmx:100500429 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0074 10 522594 524595 Prci10g0074 10 522594 524595 ECH