Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0070 ATGGAAAGTCATGAAGGAGATTCTCTTAAGCCTGAGGAGCAGTTCTCATACAGGAATCATCACAATCATGGAAGCTATGGAAATCTTGTTTTAGAAAATGGCTTATCTGATGACCACCGTTGCCAAGTTGATCCCAATGATCAGCTTCTACAAATGGCTTTTGAACTTAGATTTCAGAATGATTTTTTGAAGTCTCAGTTTGAGGGCTTTAACATTCTAAACAGTGTACATAGCGACTCTAGTCTGGGGAATAAAGTTAGTGGCCTGGCAGAAGATGAATCTGATATCATTGAAGAATTGCAGGGAAAGATGCAAGCATTAAATAAAGAACTTCTAGATGAAAAACAAACGAGAGGTGCAGCCGAAGACACTCTAAAGCATCTTCAATTGGCATACTCAGAGGCAGATACAAAAACTCAAGAGTTGTCTGAAAAGCTTGCTGAAGCTGAAAAGAAGTTGGATCAAGAAATAAAAGAGCGTGAAGAAAAGTATGCTGAACTTGATACAAAATTTAACAGGCTTCACAAACGAGCAAAACAGCGTATTCAGGAGGTTCAGAAGGAAAAAGATGATCTTGAGTTCCAATTGCGTGAGGTGAATGAAAAGGCTGAGCAAGCATCAGCCCAGCAATTGTCATTGCAGCAAGAGTTAGAGTGCACAAGGCAGCAAGCAAATGAGGCATTGAAGGCCGTGGATGGGGATAGACAGCAACTAAGAAGTGCAAATAACAAACTTCGCGATACCATTGAGGATTTGCGGCGTTCATTGCTACCAAAAGAGAGTGCCCTTGAAGCATTGCAACAGTCACTTGCAGAAAAGGAACAGATGATAGAAGATTTGAGAGGTTTGCTTCAGGCAGCTGATGAAAAGAGGCAAGCTGCACTGACTGAGCTTGCTGCTAAACATCAAAAGAATATGGAGAGTTTGGAAGCTCAACTTAATGATGCTATATCTGATAGAAATAAAGCGGCTGAAACTATTTCCTCCCTGCAGGTGCTAGTTGCAGAGAAAGAATCTAAGATTGCTGAGATGGAGGCAGCATCAACTGGGGAAGCTGCTAGACTTAGAGCAGCTGTTGAAACTGTGAAGGGAGAACTTTCTCACCTGAAACAGGAGCATGAGAAAGAAAAGGAAAGTTGGGCGACTGCAGTTCAGATACTTAAAGCAAAACTTGAAGTTGCAGAGAGCAACTGCATACATGCTGAAATTGAAGTAGCAAAAATGAGAAGTCAGCTGGAATCTGAAGTATCTGCACAAACCAGGATTCTTAATATGAGAGATGCAGAATTGTTGTCTGCCAAGGAAGAGATCAGCCATCTCGAGAATGAATTTTCTTCCTACAAGGTTCGTGCTCACTCACTTCTTCAAAAGAAGGATGCAGAACTGGCAGCAGCCAAAGACTCTGATCAACTTAAAGCTCTTGAGGAAGCTTTGAAAGAGGCTGAAAGTGAAGTGTTATCAATGACAGAAGAAAGGGATAGAGCTCTTCAAGATCTTCAAGATGCAGCAAAAAATCATGAGAAAGAGCTCACAGAAAGAGACACAGCACTTAAAAATGTCATGGAGAAAATAAGGGGCTTAGAAATGAAACTTGATTCTGCTAATGCTCAGCACCTAAAAGAGAAAGAAGCATGGGGACTCAGCCTTCAAAATGTTGAAGAAACATGGCGAATTAAATATGACGCAATGAAGGCTGAAACTGAAGGGTCTTTGGCACATGATATAAAACTACAAAAGGAACTTGAAGAGATCAAACAAAAGTACAAAAAATTGAAGGAAGAGCATGATTCTTTTCGTGATCTTGCTGATAGAATGATTCAGGAGAAAGACAATGAAATATCTAGACTTTTAGATGATAACAATAATCTTCATCAGTCCCAGCAATTTAGCTCATTGGAGGATCAATATGGTTATTATAGCACAGCCTTGCATAATGGTGGGGATACACTGAACTTAAGCCCCCCATCTGCAGAACAGCAAATTCTGCTTCTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGCTGGCACGATCACAGCGGCATATCTTGGCACTTCAAGAAGAAATTGAAGAACTTGAACGTGAAAATCGTCTCCATAGTCAACAGGAGGCAATGTTGAAAGCGGAACTTCGTAGCATGGAAAGATCAAAAAAGAGGGAGGGAGTAGATATGACTTACTTGAAAAATGTCATTTTGAAGCTTCTTGAGACAGGTGAAGTGGAGGCACTATTGCCGGTCATTGCAATGCTGCTTCAGTTTAGTCCAGAAGAGATGCAGAAGTGTCAGCAAGCATATCGCAGTTCAACAGAAGTTCCGCCAAGTCCAGGAAGTGATTCTTCGGGATCTGGCCTATCTCTTTTCTCACGATTCTCATTTTCATAG 2382 0.4118 MESHEGDSLKPEEQFSYRNHHNHGSYGNLVLENGLSDDHRCQVDPNDQLLQMAFELRFQNDFLKSQFEGFNILNSVHSDSSLGNKVSGLAEDESDIIEELQGKMQALNKELLDEKQTRGAAEDTLKHLQLAYSEADTKTQELSEKLAEAEKKLDQEIKEREEKYAELDTKFNRLHKRAKQRIQEVQKEKDDLEFQLREVNEKAEQASAQQLSLQQELECTRQQANEALKAVDGDRQQLRSANNKLRDTIEDLRRSLLPKESALEALQQSLAEKEQMIEDLRGLLQAADEKRQAALTELAAKHQKNMESLEAQLNDAISDRNKAAETISSLQVLVAEKESKIAEMEAASTGEAARLRAAVETVKGELSHLKQEHEKEKESWATAVQILKAKLEVAESNCIHAEIEVAKMRSQLESEVSAQTRILNMRDAELLSAKEEISHLENEFSSYKVRAHSLLQKKDAELAAAKDSDQLKALEEALKEAESEVLSMTEERDRALQDLQDAAKNHEKELTERDTALKNVMEKIRGLEMKLDSANAQHLKEKEAWGLSLQNVEETWRIKYDAMKAETEGSLAHDIKLQKELEEIKQKYKKLKEEHDSFRDLADRMIQEKDNEISRLLDDNNNLHQSQQFSSLEDQYGYYSTALHNGGDTLNLSPPSAEQQILLLARQQAQREEELARSQRHILALQEEIEELERENRLHSQQEAMLKAELRSMERSKKREGVDMTYLKNVILKLLETGEVEALLPVIAMLLQFSPEEMQKCQQAYRSSTEVPPSPGSDSSGSGLSLFSRFSFS 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0070 793 Coils Coil 675 709 - -
Prci10g0070 793 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 104 780 - -
Prci10g0070 793 MobiDBLite consensus disorder prediction 763 793 - -
Prci10g0070 793 Coils Coil 132 223 - -
Prci10g0070 793 Gene3D - 84 260 - -
Prci10g0070 793 Pfam GRIP domain 721 760 IPR000237 -
Prci10g0070 793 MobiDBLite consensus disorder prediction 1 19 - -
Prci10g0070 793 Coils Coil 235 255 - -
Prci10g0070 793 MobiDBLite consensus disorder prediction 1 21 - -
Prci10g0070 793 Coils Coil 352 411 - -
Prci10g0070 793 Coils Coil 90 117 - -
Prci10g0070 793 ProSiteProfiles GRIP domain profile. 717 764 IPR000237 -
Prci10g0070 793 Coils Coil 574 626 - -
Prci10g0070 793 Coils Coil 423 450 - -
Prci10g0070 793 Coils Coil 259 347 - -
Prci10g0070 793 Coils Coil 457 537 - -
Prci10g0070 793 SMART 1grip 720 764 IPR000237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0070 Prci-Chr10 484369 498398 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0070 - - gmx:100795939 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0070 10 484369 498398 Prci10g0070 10 484369 498398 ECH