Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0042 ATGTTCAAGAAGCTGGTAGAGAAAGCCTCCGTCAAGAAGCCTGCTGGAAATTCAGATGGGCTAAAAGCCAGCGATTTAGACGTACGTTTGGTTTTTCACTATGGGGTCCCATCCAACGGCACTAAGTTAGCTTATGACAATAATCAGAAGATTCTTGCTCTGTCTACAAAGGATGGCAGAATTAAACTGTTTGGAAAAAATAACACTCAAGCCATTCTCCAATCTCCTGAGCCAGTGCCTAGCAAGTTTCTACAGTTCATCCAGAATCAAGGCATCCTTGTAAATGTCACTTTCAATAACTATATTGAGGTTTGGGACCTTGACAAGAAGCTGTTGGCTGATGAATACGTTGTCAAAGGAGAAATTACTTCCTTTGCTGTCATTCAGCATAGCTTCTACATGTACATTGGAGATTCTGTTGGTAATATTTCGGTCTTCAACCTGGATCAAGAACCATGGCATATAGTAAACATGAAATACATCATCCCTCTGTCAGCTTCCTATGGGATTCTGACTGAAGTGCCTGATGATACTGCCGTGACACATATACTACCTCAACTAGCAGCTGAAAGTAAGAGGGTTCTCATAATTTTTAGAAATGGCCAAATAATATTATGGGATATTCAAGAAAGCAAATCTATCTTCAGAACTGGTGGAAACATATCACAACCATCCTATAATGAAACTAAGAAAGCGACTTCTGCATGCTGGGCATGTCCTTTCGGAAGTAAAGTGGTTGTAGGGTACAGCAATGGAGAGCTTTTAATTTGGAATGTCCCTTCTCAAAACGTTGGAAATGATTTGGCATCTGATTATGCTACTCAAAACACTCCTATGTTCAAGCTTAACCTAGGATATAAATCAGATAAAATTCCCATTGGCTCAGTAAAATGGATATATGGTGAAGGAAAGGCAAGTCGACTTTATGTCATCGGAGCTTCTGACATTGCATCTCCAAACTTAGTCCAGGTAGTGTTACTGAATGAGAAGACTGAGTCTCGCACAATTAAGCTGGGTCTTCATTTGGCTGAATGCTGTATTGACATGGAGGTCTTATCAACTTCAAGTGAGCAAAGCAAGCATAAACAAGATTCTTTAGTTTTGCTTGGGAAATCAGGCCGTGTTTATGCGTACGATGATAGTTCGATTGAAAGGTATCTTCTACAATGCCAGTCTAAGTCCTCACCGTCACTGCCAAGGGAAGTGATGATTAAGTTGCCACTGGCAGATTCAAGCATCACGGCGGCAAAGTTCATCTCGGACAATCCTAATCTCCGAAATCCAGATGATGAGGAATATGTTCAGTTGTTGAGGAATTACCCACCTCTTATGCCCGTTGAAACAAAACACAAAGACGGGGCTATTCTGAATTCTTCGAACTTCACTGGATTTTCAAAAGTCAAAAACTTGTACATAACTGGCCACAGTGATGGAGCCATAACTTTCTGGGATGCGTCATGTCCCTTTTTCATCCCAATTTTGCAGTTGAAGCAACAGAGTGAACATGAGTTTTCTACAAGGGGCATACCCATAACAGCATTATATTTTGATACCAACTCTCCTCTTCTTGTTTCTGGAGACCAGAGTGGAATGGTTTGCATCTTCAGATTCAAACCTGAACCTTATTCAAGCAACAGCTTCATATCTCTTACGGGAAGCACCAAAAAAGCGGCTGATCATATAATTCACAGTGTGAAACTTGTAAAGACTAATGGTGCTGTACTATCCATGAACATCGATCATGGCTCAAAACATCTCGCTGTTGGTTCTGACCAAGGATGTGTTTCAGTTATTGATATGAATGGCTCAACTTTGTTATATCAGAAACAAATCACAAGTGGGATTAGTACCGGTATCATCTCTCTACACTTCCGAACATGCAGTTTGCAGGGTTTTAAGAAAAATATTTTAGCTGTTGGAACAAAGGATTCATCTGTTCTGGCATTTGATAGTGAAACTGGAAAAAAATTGAGTTCTGACGCTGTTCATCCTAAGAAGCCGTCTAGAGCTCTGCTTATGCAAGTGTTAGATGGTCAAGGAGAATTAACCAAAGGGTTGGGCACAAGCGAAGTGAATGATATTGAGGATGCAACAACAAAGCAATCGAGCATTTTGTTGTGTTCTGAGAAAGCTTTGTATGTATATTCTTTAGTGCATGTTGTTCAGGGTGTTAAAAAGGTGCTTCACAAGAAGAAGTTTCATTCCTCATCCTGTTGCTGGGCATCTACATTCTACAGTCATTCTGATATTGGACTTGTGCTCCTCTTCACCAATGGAAAAGCAGAGCTAAGGTCTTTGCCAGAGTTATCCCTGATCCTGGAGACCTCAATTAGAGATTTCATCTATTCACCATCGAAATTAAAGTCATTTTCTGATAGACAGATGTGCTGTTCGTCCGAAGGAGATCTTGTTATGGTGAATGGTGACCAGGAAATTTTGGTTGCCTCAATGATAGCCCAGAGGGATGTTTTCAGGCTTTTGGACAGTGTCAGCTGTGTCTACATAAAAGAGAGGAAGCAGCAATATGAAGAAGCTGTCCCTGCCCCGGTCATCATCCATAAAGAAAAGAAAAAGGGTATATTTAGCTCTGTTATCAAAGATTTTACTGGCAGTAAAGAAAAGCATTTGACCCTCATGGAATTAGAAGATACAAAAGAAAGCATGCGGCAACTCTCAGTGATCTTTTCTAATGCAAATTTTCCGAGTGATGCTGACAATAATGAAAACCTTACCATGGATGAGGATGAGCTTGAATTAAACATAGATGACATTGACCTCGGGGATCCCAGAGAGAGACGCAAAGATCAAAGGATACTGGGGACTCTCAATAAGACGAATTTGACTGGCAAATTTCAGGCTCTGAAGGGAAGGTTGAAAGACATGAAGGGAAACATCCAGAAAACATCAGATAAGGAAGAGCAGCAAGATGAGAAAGGTGGTGCAGTTGATCAAATCAAGAAAAAATATGGGTTTTCTTCTTCCTCCGACGAAACTAGCACTGCTAAATTGGCACAGAACAAGTTGCAGGAGAACATGCGAAAACTACAGGGTATCAATCTTCGAGCTACAGAGATGCAGGATACAGCAAGATCATTTTCATCATTGGCGAAACAGGTTCTGCGAACTGCTGAACAAGATAAGCGTTGA 3147 0.4077 MFKKLVEKASVKKPAGNSDGLKASDLDVRLVFHYGVPSNGTKLAYDNNQKILALSTKDGRIKLFGKNNTQAILQSPEPVPSKFLQFIQNQGILVNVTFNNYIEVWDLDKKLLADEYVVKGEITSFAVIQHSFYMYIGDSVGNISVFNLDQEPWHIVNMKYIIPLSASYGILTEVPDDTAVTHILPQLAAESKRVLIIFRNGQIILWDIQESKSIFRTGGNISQPSYNETKKATSACWACPFGSKVVVGYSNGELLIWNVPSQNVGNDLASDYATQNTPMFKLNLGYKSDKIPIGSVKWIYGEGKASRLYVIGASDIASPNLVQVVLLNEKTESRTIKLGLHLAECCIDMEVLSTSSEQSKHKQDSLVLLGKSGRVYAYDDSSIERYLLQCQSKSSPSLPREVMIKLPLADSSITAAKFISDNPNLRNPDDEEYVQLLRNYPPLMPVETKHKDGAILNSSNFTGFSKVKNLYITGHSDGAITFWDASCPFFIPILQLKQQSEHEFSTRGIPITALYFDTNSPLLVSGDQSGMVCIFRFKPEPYSSNSFISLTGSTKKAADHIIHSVKLVKTNGAVLSMNIDHGSKHLAVGSDQGCVSVIDMNGSTLLYQKQITSGISTGIISLHFRTCSLQGFKKNILAVGTKDSSVLAFDSETGKKLSSDAVHPKKPSRALLMQVLDGQGELTKGLGTSEVNDIEDATTKQSSILLCSEKALYVYSLVHVVQGVKKVLHKKKFHSSSCCWASTFYSHSDIGLVLLFTNGKAELRSLPELSLILETSIRDFIYSPSKLKSFSDRQMCCSSEGDLVMVNGDQEILVASMIAQRDVFRLLDSVSCVYIKERKQQYEEAVPAPVIIHKEKKKGIFSSVIKDFTGSKEKHLTLMELEDTKESMRQLSVIFSNANFPSDADNNENLTMDEDELELNIDDIDLGDPRERRKDQRILGTLNKTNLTGKFQALKGRLKDMKGNIQKTSDKEEQQDEKGGAVDQIKKKYGFSSSSDETSTAKLAQNKLQENMRKLQGINLRATEMQDTARSFSSLAKQVLRTAEQDKR 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0042 1048 SUPERFAMILY WD40 repeat-like 568 801 IPR036322 GO:0005515
Prci10g0042 1048 Pfam Lethal giant larvae(Lgl) like, C-terminal 587 823 IPR013905 -
Prci10g0042 1048 CDD R-SNARE_STXBP5_6 984 1041 - -
Prci10g0042 1048 SUPERFAMILY WD40 repeat-like 42 608 IPR036322 GO:0005515
Prci10g0042 1048 SMART WD40_4 497 536 IPR001680 GO:0005515
Prci10g0042 1048 SMART WD40_4 108 147 IPR001680 GO:0005515
Prci10g0042 1048 SMART WD40_4 399 484 IPR001680 GO:0005515
Prci10g0042 1048 SMART WD40_4 564 599 IPR001680 GO:0005515
Prci10g0042 1048 SMART WD40_4 604 650 IPR001680 GO:0005515
Prci10g0042 1048 SMART WD40_4 219 258 IPR001680 GO:0005515
Prci10g0042 1048 SMART WD40_4 25 65 IPR001680 GO:0005515
Prci10g0042 1048 FunFam Syntaxin-binding protein 5 isoform A 21 180 - -
Prci10g0042 1048 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1 1042 - -
Prci10g0042 1048 Gene3D - 41 394 IPR015943 GO:0005515
Prci10g0042 1048 Gene3D - 450 673 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0042 Prci-Chr10 342473 351667 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0042 - - gmx:100793138 1516.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0042 10 342473 351667 Prci10g0042 10 342473 351667 ECH