Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0037 ATGACGAGCATAAGGCCTTTGTCCGACGATGTTCGTAGTTCTTTGCGTTCTGGCATTTTCTTGTTCGATTTGACGAGGGTTGTGGAAGAACTCGTTTTCAATAGCCTGGATGCTGGCGCAACGAAGGTCTCAGTCTTTGTTAGTGTCCGGAGCTGTTATATAAAAGTAGCGGATGATGGAGTTGGTATTACTCGAGATGGATTGACGTTGGTTGGAGAAAGATATGCAACATCAAAGTTACTTAGTTTGGCTGACCTGAATGCCACAAGTGGACACTTTGGCTTTCGGGGGGAAGCTTTAGCTTCAATTTCAGAAGTTTCTCTGTTAGAAATTCTGACAAGAACTTTTGGAAGGGCAAATGGATACCGCAAACTATTGAAGGGCTGCAAGTGTCTATATTTGGGCATAGATGATGATAGAAAAGAAGTGGGAACAACAGTTGTTGCTCGTGATTTATTTCACAACCAACCAGTTCGGAGGAAATATATGCAATCCAGCCCAAAGAAGGTTCTGCAATCAGTCAAGAAATGTATGTTGCGGCTTGCACTTGTGCGTCCAAACGTTTTGTTCAAAGTTGTTGATATTGAAAGTGAGGATGAACTTCTTTGCACACATTCTTCTTCTTCTCCACTGTCACTTTTAACCAGTGGCTTTGGGGTGGAGGTCTCAAGCTCTCTTCATGAATTACAAGATCAGGATGATGTCATAAAGCTTTCAGGATACATATCTGGCCCCTGCAATAATTTTACTCTGAAGGCCTTGCAGTATATCTATATCAATTCACAATTCATTAGCAAAGGCCCAATTCATAAGCTTCTGAGTCAACTGGCTGTTAGGTTTGAGCATCAGGACTCACAGAATGCAGGTGACAAGTTCCAGAACAAGAAGAGAAGTAGATCTCAAGCATATCCAGCTTATATCTTGAATTTGCTTTGCCCACGGTCTCTGTATGATTTAACCTTTGAGCCGTCAAAGACTTCCGTTCAATTTAGGGATTGGACTTCTGTACTGAACTTCATTGAGAAGGCCATAAAAAATTTCTGGGGGAAGAACATAACCCATGGAGGGTATTCTAATGCCACTCATGTGGTTCAAGCAGGTCAACCGTCCAATGAAATTGACAATGTTATTTTGGCTGAAGCAGATATAGTGAACCGTGGAAACCAAAAGAGGAAGGAATTCTTTGACATTTTCTTTTCCACTTCAGCTAGGTTAGCTGAAGATCACCATTGCCTATCTGATGGGCAAGTCATTAGTAGATCCTCCCTTGGTTATTTGCCTGGGGATGCTGCAAAGTTCAAAGAGAAACAAAATAAGAGAGGCTTTCTATGTCAGACTGGTTACTCTAACTTTTCAATGGATGGATCATTTATCAAGTGTGGCTTTACTGTGACTAAAAATAATTGCAGTATGTGGAATGATAACTACTGTCTATCTGGAAGAGATGATTTCTTGGATGGTGAGTTTGCTGCTGGAGAAATCTTCACAGGTAATGTATCTTTTGATGCACCACGCTCAACAAAGGGAAACAAATTTCTTGAAGTTGATGATGATATGCTCAATGAATCATCCCAAGGTGCCTTGCATTATGGCTGTAATGAGCTCTGTAATGATGTAGAGATTGACAGGGATTTTCAAAAGCCTTTTCTGAAGAGTTGCTCTGCTCGAGGTAGTATTCTGCATGAGAAGGCCTTGTTTGCAAATGATGAACATGAGTTTCAAATTGATGGCTTTAGCTCCAAGCAAGATTTGGGAATGTGTGGTGGCAGAGTTGAGAACTTAGGTGCCCATCCCTATCCAGAAGTTGTAGAAATATTTAGCACATCCAGAGATTCTGTTTTTCTCTCAAGAGCATCTACTGAAGAAACATGTTTTCCTTCAGATTCATGCTCTTTGGCAACACAAATGGGGTGTCGTAGGTTTGTTGAAGAAACATGTTTTCCTTCAAATTCAAGCCATCTAGAGTTATCGACATTAGATCATTACCCCATCTTCAAGACACCATTACTTGAAACCACTTCATGGGGTGATGATCTTATGACAGGCACTGATCTTGATGTTCTTGGAGGAATACCTAGATGCTACAAATGGGGTGGTTATAAAAAAAATTCAGATGCTAATGAAAAAAGATGCAATTGTAGCTGTGATATCTTATATAGATTCAACTCAGATCAGTGCATGAGAAGTTTTGGAAGCAATAGATCTCATTTTGACGGTGCCTATAACTGTAATAATTTGAATTTTACCAAATGGCCAGATCCTAGGTTAGTCAAATGGCCTAATTGTTATGATATAGATTCCAACAAATTGTCAGATATTTTAACAGATGAGTCAGATTGGTTGTGTCCAGTGCCATGTGGTGAAAGCTACCAAAGACTTAGCAAGAACAGAATGAAAAAGGATTGTGTTAGACATTTAGCTTCAGAAAAGAATCATGAAAGATCTAGAAGAAGCTTTTCAGCCCCTCCATTTCACAAAAGCAAAAGAAGGTTTAATTCTTTAAATCAACATTTAGCAATGATGGCCAAAAGACTTGCAAGCCAAACCTCCAGCTTTGCTTTGAAGAAAAGAGAAGCTGATGAAGAGTGTCCCCCGGAATCTTTTGGTCCATCTCACCCAAGCCCTGAGGAATATCTGTTGCTTGAAAATAATTCCATTGTGAAGCAGAAAACATCTACTCTGGGATATACACAGCAGGTTAATAGCAATAAAGAGTTTGACTGGTTTCAAAGTTTCAATAGTCAAAGCAATGCTCCATTTAAAGAATTGACCTCAAGGAAAGTGGAAGATTCTATGGATTACAGGACAAAATGGAGGAACTACTCGCCTGAAATTCCAACAAGGGATAAAGCACTTGATTTTCATAGTCAAGATGATATACTTGACATATCTTCTGGATTCTTGCATCTTGCTGGTGATTCATTAGTACCTGAAACTATCAGTAAGAACTGCCTTCAGAATGCCAGAGTTCTTCATCAGGTGGATAAGAAATTCATTCCAGTTGTGGCCGGGAGAACCCTTGCTGTTATTGATCAGCATGCTGCAGATGAGAGAATCAGATTGGAAGAATTACGTCAAAAGGTATTATCAGGAGAAGCAAAGACAATAAATTATCTAGATGCTGAACAGGAACTGGTGCTGCCTGAGATTGGCTATCAACTGTTGCACAGTTATTCTGAACAGATTAAAGATTGGGGATGGATCTGTAACGTTCATGCTCAAGATTCAAAATCCTTCAAGCAGAATTTGGATATTCTCAACAAGCAGCCAGCTGTTGTTGCACTTATTGCGGTACCCTGCATTTTAGGTGTCAACTTAAATGATATTGATCTTATGGAATTTCTTCAGCAGCTTGCTGACACGGATGGGTCATCAACAGTGCCACCGTCTGTTGTACGAGTTCTTAATTTGAAAGCATGCAGAGGTGCAATTATGTTTGGGGACTCATTGCTGCCATCCGAATGTTCGCTCATTGTTGAAGAGCTAAAGCAGACGTCACTCTGTTTCCAATGTGCTCACGGGAGACCAACTACTGTTCCTCTTGTCAACCTGGAGGCGCTGCATACTCAGATAGCCAAGCTTGGACCAATGATCGGTTGCTCAAATGATGAGTGGCATGGACTACGAAGACACAAAATTAGCGTTGAACGTGCTGCACAACGCTCATGTTCCTCTGGAGAATAG 3684 0.4053 MTSIRPLSDDVRSSLRSGIFLFDLTRVVEELVFNSLDAGATKVSVFVSVRSCYIKVADDGVGITRDGLTLVGERYATSKLLSLADLNATSGHFGFRGEALASISEVSLLEILTRTFGRANGYRKLLKGCKCLYLGIDDDRKEVGTTVVARDLFHNQPVRRKYMQSSPKKVLQSVKKCMLRLALVRPNVLFKVVDIESEDELLCTHSSSSPLSLLTSGFGVEVSSSLHELQDQDDVIKLSGYISGPCNNFTLKALQYIYINSQFISKGPIHKLLSQLAVRFEHQDSQNAGDKFQNKKRSRSQAYPAYILNLLCPRSLYDLTFEPSKTSVQFRDWTSVLNFIEKAIKNFWGKNITHGGYSNATHVVQAGQPSNEIDNVILAEADIVNRGNQKRKEFFDIFFSTSARLAEDHHCLSDGQVISRSSLGYLPGDAAKFKEKQNKRGFLCQTGYSNFSMDGSFIKCGFTVTKNNCSMWNDNYCLSGRDDFLDGEFAAGEIFTGNVSFDAPRSTKGNKFLEVDDDMLNESSQGALHYGCNELCNDVEIDRDFQKPFLKSCSARGSILHEKALFANDEHEFQIDGFSSKQDLGMCGGRVENLGAHPYPEVVEIFSTSRDSVFLSRASTEETCFPSDSCSLATQMGCRRFVEETCFPSNSSHLELSTLDHYPIFKTPLLETTSWGDDLMTGTDLDVLGGIPRCYKWGGYKKNSDANEKRCNCSCDILYRFNSDQCMRSFGSNRSHFDGAYNCNNLNFTKWPDPRLVKWPNCYDIDSNKLSDILTDESDWLCPVPCGESYQRLSKNRMKKDCVRHLASEKNHERSRRSFSAPPFHKSKRRFNSLNQHLAMMAKRLASQTSSFALKKREADEECPPESFGPSHPSPEEYLLLENNSIVKQKTSTLGYTQQVNSNKEFDWFQSFNSQSNAPFKELTSRKVEDSMDYRTKWRNYSPEIPTRDKALDFHSQDDILDISSGFLHLAGDSLVPETISKNCLQNARVLHQVDKKFIPVVAGRTLAVIDQHAADERIRLEELRQKVLSGEAKTINYLDAEQELVLPEIGYQLLHSYSEQIKDWGWICNVHAQDSKSFKQNLDILNKQPAVVALIAVPCILGVNLNDIDLMEFLQQLADTDGSSTVPPSVVRVLNLKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHTQIAKLGPMIGCSNDEWHGLRRHKISVERAAQRSCSSGE 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0037 1227 MobiDBLite consensus disorder prediction 807 827 - -
Prci10g0037 1227 Pfam MutL C terminal dimerisation domain 989 1150 IPR014790 GO:0005524|GO:0006298
Prci10g0037 1227 SMART MutL_C_2 990 1150 IPR014790 GO:0005524|GO:0006298
Prci10g0037 1227 FunFam MUTL protein homolog 3 1034 1145 - -
Prci10g0037 1227 SUPERFAMILY DNA mismatch repair protein MutL 988 1181 IPR037198 -
Prci10g0037 1227 SUPERFAMILY Ribosomal protein S5 domain 2-like 198 349 IPR020568 -
Prci10g0037 1227 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
Prci10g0037 1227 Gene3D - 214 353 IPR014721 -
Prci10g0037 1227 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 118 - -
Prci10g0037 1227 FunFam DNA mismatch repair endonuclease MutL 1 213 - -
Prci10g0037 1227 Gene3D - 1034 1145 IPR042121 -
Prci10g0037 1227 CDD HATPase_MutL-MLH-PMS-like 11 193 - -
Prci10g0037 1227 Gene3D - 993 1181 IPR042120 -
Prci10g0037 1227 Gene3D - 2 208 IPR036890 -
Prci10g0037 1227 NCBIfam DNA mismatch repair endonuclease MutL 4 351 IPR002099 GO:0005524|GO:0006298|GO:0030983
Prci10g0037 1227 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1186 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Prci10g0037 1227 SMART DNA_mis_repair_2 214 349 IPR013507 GO:0005524|GO:0006298|GO:0030983
Prci10g0037 1227 Pfam DNA mismatch repair protein, C-terminal domain 218 346 IPR013507 GO:0005524|GO:0006298|GO:0030983
Prci10g0037 1227 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22 200 IPR036890 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0037 K08739 - gmx:100788019 1354.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0037 10 294714 315412 Prci10g0037 10 294714 315412 ECH